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Domain assignment for gi|338212018|ref|YP_004656071.1| from Runella slithyformis DSM 19594

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|338212018|ref|YP_004656071.1|
Domain Number 1 Region: 123-280
Classification Level Classification E-value
Superfamily Nitrite and sulphite reductase 4Fe-4S domain-like 1.96e-40
Family Nitrite and sulphite reductase 4Fe-4S domain-like 0.00053
Further Details:      
 
Domain Number 2 Region: 406-570
Classification Level Classification E-value
Superfamily Nitrite and sulphite reductase 4Fe-4S domain-like 3.14e-28
Family Nitrite and sulphite reductase 4Fe-4S domain-like 0.0018
Further Details:      
 
Domain Number 3 Region: 17-122
Classification Level Classification E-value
Superfamily Nitrite/Sulfite reductase N-terminal domain-like 2.78e-26
Family Duplicated SiR/NiR-like domains 1 and 3 0.01
Further Details:      
 
Domain Number 4 Region: 259-283,318-419
Classification Level Classification E-value
Superfamily Nitrite/Sulfite reductase N-terminal domain-like 4.58e-24
Family Duplicated SiR/NiR-like domains 1 and 3 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|338212018|ref|YP_004656071.1|
Sequence length 723
Comment ferredoxin--nitrite reductase [Runella slithyformis DSM 19594]
Sequence
MSIPFSPNVSEAARRDILELESKISVFRSGDVPEEAFRKFRLARGVYGQRQPGVQMIRIK
LPYGRITADQLVRIADCSDKYATGNLHATTRQDIQLHFVKLADSPALWAELEDAHITLRE
ACGNTVRNVTASARAGIDPEEPFDVTPHAHAIFDYFLRNPICQDMGRKFKIAVSSSEKDS
AYAFMHDVGLIPLVRYAEDGTPIHGFKVLVGGGLGAQPLLAQVAHEFLEEQFVIPFIEAV
IRVFDRYGERVRRHKARMKFLLADIGLEEFLKRVEEEQKALKNKEYTIPTLPFPISEVKA
GESTLTKEDLIAAAPDLNSPYTHWLKTNVFEQKQKGWYAVQLRVLLGDMHSSTARQLAEI
VREYAADDIRVTVNQGYILRFVKADDLPAIYDRLQALGLAEPGFDTTADITTCPGTDTCN
LAISSSYGITRVLETMMKEEFPDIIYNNDIKIKISGCMNGCGQHSASNIGFHGSSIKNGK
FVLPALQVLLGGGFNGAGEGMMGDKVIKLPTKRGPAALRTLLLDYETNAYEGEYYNDYFL
RQGNKYFYSMLKPLADLTTVVSSDYVDWDHEEPFQTEVGVGECASVLIDLVATTIIEAND
KLAWANENLEKAIWADAIYHAYNVFVTGAKALLVSKGIPTNTQYGIVRDFDEHFGADFSD
LSEGASFKELVFSINKNEPTEAFAREFVAKATRFVEKVNAIRRQQLESEGEPELALVEFG
KDS
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Identical sequences F8EF62
WP_013928250.1.37789 gi|338212018|ref|YP_004656071.1|

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