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Domain assignment for gi|113955565|ref|YP_730835.1| from Synechococcus sp. CC9311

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|113955565|ref|YP_730835.1|
Domain Number 1 Region: 4-229
Classification Level Classification E-value
Superfamily PHP domain-like 6.08e-33
Family PHP domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|113955565|ref|YP_730835.1|
Sequence length 1174
Comment DNA polymerase III subunit alpha [Synechococcus sp. CC9311]
Sequence
MAFVPLHNHSDYSLLDGASQLPQMVGRAKELGMPALALTDHGVMYGAVELLKLCKGAGIK
PIIGNEMYVINGSIDDPQPKKERRYHLVVLAKNATGYRNLVKLTSISHLRGMRGRGIFSR
ACVDKQLLKQYGEGLIVATACLGGEIPQAIMRDRPDVARDVALWYQQTFGDDFYLEIQDH
GSPEDRIVNVEIVRIAKELGIPLIATNDAHYLTRNDVEAHDALLCVLTGKLISDVKRLRY
TGTEYLKSEEEMSRLFVDHLEPDVVAEAISNTVQVADKVEDYDILGRYQMPRFPIPEPHT
PVSYLREVTEQGLRNRLEIDSETAIDPNYGDRLSHELKIMEQMGFPTYFLVVWDYIRFAR
EQGIPVGPGRGSAAGSLVAYALGITNIDPVSNGLLFERFLNPERKSMPDIDTDFCIERRG
EVIDYVTRRYGEDKVAQIITFNRMTSKAVLKDVARVLDIPYGDADRLAKLIPVVRGKPAK
LAAMIGEESPNPEFREKYKKDPVVKRWVDMAMRIEGTNKTYGVHAAGVVIAADPLDELVP
LQRNNDGQVITQYFMEDVESMGLLKMDFLGLKNLTMIDKTLELVAATIGEKVDPDKLPLE
DPETYALLARGDLEGIFQLESTGMRQIVRDLKPSSLEDISSILALYRPGPLDAGLIPKFI
NRKHGRETIDFAHHSIEPILQETYGIMVYQEQIMKIAQDMAGYSLGEADLLRRAMGKKKV
SEMQKHRGIFVQGASDRGVDKKVADELFDQMVLFAEYCFNKSHSTAYGAVTYQTAYLKAH
YPVAYMAALLTVNAGASDKVQRYISNCNAMGIEVMPPDINASGIDFTPKGDRILFGLSAV
RNLGDGAIRAVIGSRESEGAFQSLADLCDRLPSAVLNRRSMESLIHCGAMDALEPEANRA
QLMADLDLLLDWATSRAKDRASGQGNLFDLMAAASSDGAEDAGTDLSLAPKAPPVKDYHP
TEKLRLEKDLVGFYLSDHPLKQLTPPAKLLAPIGLGSLEEQADKAKVSAIAMVSEMRQVT
TRKGDRMAVLTLEDLTGSCEAVVFPKSYARLADHLMAEARLLVWAAVDRRDERVQLIVDD
CRAIDDLRLLMVELDPEQASDVAVQHKLRECLQAYRPDQEQLGVRVPVVAAVRQGNTVRY
VRLGPQFCVRDASAAALHLQEKAFKVKCSEPLLN
Download sequence
Identical sequences Q0I9N7
WP_011619550.1.57161 gi|113955565|ref|YP_730835.1| 64471.sync_1630

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