SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|150390675|ref|YP_001320724.1| from Alkaliphilus metalliredigens QYMF

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|150390675|ref|YP_001320724.1|
Domain Number 1 Region: 45-554
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 3.8e-116
Family Phosphate binding protein-like 0.00000102
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|150390675|ref|YP_001320724.1|
Sequence length 566
Comment extracellular solute-binding protein [Alkaliphilus metalliredigens QYMF]
Sequence
MVFLLTMILLISTFLVGCGGTDTQTSSQEGSALGEGSDFDNPATRRGNVLTVGGTDVNGI
FNPITYSTVYDSYIIGLVFDTLLGMETDGTLVTEGGLLENYEISEDGLIYTFTLKEGLVW
HDGQPITAEDIAFTYETIMQPDYKGRLFNNVQDIVGANEVKKGVAESAEGINVIDERTIE
IVTTVAKATTLRNLAGERMFPIPKHYYDVGSADAMAELDREPIGNGPFKIKNYVVEQYVE
FEPNVDYWQGTPKLDGIIYKVVANVNELSEFQVGSVDAVNFENAIENYETIEGPTFKHGE
LLNNWNNGYTYVSFNFKNPIFQDQRVRQALVYGVDRAGFVQSFFGDLGGAVAHSPISPVS
WAYPEAELNPYEYSTEKANELLDEAGWKMKDDGFRYKDGEKLAFTWTSYNDAEWSVQFTA
LAKENWKHIGVDCEIELMDFNSLSTLVGDLNNHDKWDMFNMAWSLTADPNMQSTYAKEHT
PPGNNRGYYANEEIEALMEEGVLELEQEKRKEIYQELAHKFNEDLPYIYVYTRMNPWLIN
KRVKNFQPSEFVEWYANAHEIEIIEN
Download sequence
Identical sequences A6TS97
293826.Amet_2915 WP_012064033.1.32322 gi|150390675|ref|YP_001320724.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]