SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|150392400|ref|YP_001322449.1| from Alkaliphilus metalliredigens QYMF

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|150392400|ref|YP_001322449.1|
Domain Number 1 Region: 40-525
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 4.52e-112
Family Phosphate binding protein-like 0.00000000208
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|150392400|ref|YP_001322449.1|
Sequence length 533
Comment nickel ABC transporter periplasmic nickel-binding protein [Alkaliphilus metalliredigens QYMF]
Sequence
MKCNKIVVMILVLALSFSMVGCNTATTQASGDIGEEKTQLVYASTKDIRDINPHTYSGEM
AAQNMVFESLVINTDEGVKPWLAENWEISEDGKTYTFKLREDVKFTDGEVFNAAAAKMNI
DAVMNNFERHAWLELVNQIDHVDIIDDFTIDLVLKNAYYPTLSELALTRPFRFISPNSFI
DGNTKEGVNGYIGTGPWVLSEHKENQYAIFTANESYWGEKAKLNAVKWQVMPDHQTILLA
LEKGEIDLLFGADGDMVDLDSFKALEDRGKYVTVMSEPIASRAILLNSNKEITGDIKVRE
ALQYAIDKEGIAEGILNGSESVADTVLSPTVAYCNVDLEKRSYDIDKASKLLDAAGWTLG
NDGYRYKDGAKMEITIYYNSDNSQERMISEYMQDNLKNAGVNLKIVGEEKQAFLDRQKTG
DFDLQYSLSWGIPYDPQSYVSSWRIPAHGDYQAQVGLEKKAWLDEMIGNVMIETDENTRQ
EMYNEILTYIHDASVYIPLTYSRTKAVYEPSLRGVGFNTSQYEIPFENMYFQQ
Download sequence
Identical sequences A6TX72
gi|150392400|ref|YP_001322449.1| WP_012065675.1.32322 293826.Amet_4722

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]