SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|150391036|ref|YP_001321085.1| from Alkaliphilus metalliredigens QYMF

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|150391036|ref|YP_001321085.1|
Domain Number 1 Region: 56-363
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 1.47e-37
Family Phosphate binding protein-like 0.0044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|150391036|ref|YP_001321085.1|
Sequence length 417
Comment putative ABC transporter solute-binding protein [Alkaliphilus metalliredigens QYMF]
Sequence
MIKGKKTIMRKIILFLLIAGLIFNLAGCSQEAVVAGGNEDLLEKSWKSILEEAEGTEISF
YGWGGSQMTNDWLDNFLVPRLKEEYNITLNRVPMDIDQVLNKLLGEKQMNVTGTADVIWI
NGENFSTARSNDLLYGPFTHKLPNFNQYIDAESVEVKYDFGFPVEGYEAPYGKAQFVLVY
DEARVEQVPKGHEELMELVKNNPGKFTYPAPPDFTGSAFIRNIIYDIVGYEQFITMEADK
EVIAKAIQPAMDYLKELKPYLWRNGETYPATIAQLDNMYADHEVFMSMNYNPNEAAARIK
TGEFPRTTNTFVFEKGTIGNTHFLAIPDNAPNKAGALAVIDFILSVEAQASKYNPDNWGD
LPVLDNTRLSDSERVIFDDIQIGEGALPQHILLDHRVPEMPANFVPIIEEIWMENIL
Download sequence
Identical sequences A6TTA8
293826.Amet_3295 WP_012064391.1.32322 gi|150391036|ref|YP_001321085.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]