SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|532356936|ref|YP_008446770.1| from Lactobacillus paracasei subsp. paracasei 8700:2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|532356936|ref|YP_008446770.1|
Domain Number 1 Region: 5-234
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.13e-54
Family G proteins 0.0001
Further Details:      
 
Domain Number 2 Region: 408-503
Classification Level Classification E-value
Superfamily EF-G C-terminal domain-like 1.01e-24
Family EF-G/eEF-2 domains III and V 0.0098
Further Details:      
 
Domain Number 3 Region: 301-379
Classification Level Classification E-value
Superfamily EF-G C-terminal domain-like 6.83e-18
Family EF-G/eEF-2 domains III and V 0.0045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|532356936|ref|YP_008446770.1|
Sequence length 612
Comment GTP-binding protein lepA [Lactobacillus paracasei subsp. paracasei 8700:2]
Sequence
MNQEEMLDRQKHIRNFSIIAHIDHGKSTLADRILELTDTIAKRDMQAQVLDDMALERERG
ITIKLNAVELHYKAKNGETYIFHLIDTPGHVDFSYEVSRSLAACEGALLVVDATQGVEAQ
TLANVYLAIDDDLEIIPVINKVDLPSAQPDVVKEEIEEMIGLDASDAILASGKTGLGVPE
ILERIVTDVPAPSGDLNAPLQALIFDSVYDDYRGVVLDVRVKEGQVKVGDTIQLMSNGKQ
FQVTEVGVMSPKAVKRDFLMVGDVGYITAAIKTIQDTRVGDTVTLADRPAEKALKGYRKI
TPMVYSGLFPVDNAKFNDLREALEKLQLNDAALEFEPETSQALGFGFRCGFLGLLHMDVV
QERLERDYDLDLIMTAPSVDYEIIMTDGTEKTIDNPADMPEVSEIKEIREPYVKASIMVP
NDYVGPVMELSQRKRGEFVTMDYLDKYRVNVIYNLPLSEIIYDFFDDLKSSTKGYASLDY
EITGYRQSDLVKMDILLNGDPVDALSTIVHKDFAYERGKAIVARLKTTIPRQQFEIPIQA
AIGNKVIARSTVKAYRKNVLAKCYGGDITRKRKLLEKQKAGKKRMKSVGSVEVPQEAFMS
ILKMNDEESQGK
Download sequence
Identical sequences A0A1V0Q2X3 K6QH41
WP_003565741.1.13963 WP_003565741.1.25941 WP_003565741.1.3835 WP_003565741.1.42997 WP_003565741.1.48252 WP_003565741.1.66157 WP_003565741.1.67564 WP_003565741.1.7166 WP_003565741.1.91737 gi|532356936|ref|YP_008446770.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]