SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|123965467|ref|YP_001010548.1| from Prochlorococcus marinus str. MIT 9515

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|123965467|ref|YP_001010548.1|
Domain Number 1 Region: 10-226
Classification Level Classification E-value
Superfamily Ribosomal protein L1 4.84e-78
Family Ribosomal protein L1 0.000000764
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|123965467|ref|YP_001010548.1|
Sequence length 235
Comment 50S ribosomal protein L1 [Prochlorococcus marinus str. MIT 9515]
Sequence
MKKLSKRMTALSTKIEDRTYAPLEALAIIKENANAKFDETIEAHIRLGIDPKYTDQQLRT
TVALPHGTGQSIKIAVITSGENVAKAKSAGADLFGEEDLVESINKGNMDFDLLIATPDMM
PKVAKLGRVLGPRGLMPNPKAGTVTSDIASAIKEFKAGKLEFRADKAGIVHVRFGKASFT
ENALFENLKTLQESIDKNKPSGAKGKYWKTFYVTSTMGPSVQVDINALQDYQPES
Download sequence
Identical sequences A2BUI0
167542.P9515_02321 WP_011819555.1.83733 gi|123965467|ref|YP_001010548.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]