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Domain assignment for gi|123966264|ref|YP_001011345.1| from Prochlorococcus marinus str. MIT 9515

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|123966264|ref|YP_001011345.1|
Domain Number 1 Region: 176-343
Classification Level Classification E-value
Superfamily alpha/beta knot 1.31e-41
Family SpoU-like RNA 2'-O ribose methyltransferase 0.0000742
Further Details:      
 
Domain Number 2 Region: 106-181
Classification Level Classification E-value
Superfamily L30e-like 0.00000000000000306
Family RNA 2'-O ribose methyltransferase substrate binding domain 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|123966264|ref|YP_001011345.1|
Sequence length 349
Comment RNA methyltransferase TrmH, group 3 [Prochlorococcus marinus str. MIT 9515]
Sequence
MKNFSKNNYSRKNNDKYSRRSQSKNREKSNDFKGERFNSIKNNTFERTNLKKSDDFKGNE
YNILRSKAKSRNNFIQPKRKISTNNTKAEKYAENSSKNLLINTNVKTFDDWIWGKHSVFA
TLNTERPINRIWCTSEIFSSEKFFLLLKDLKSKGVLVEEVSWSRLSQLTSGAVHQGVALQ
LATSQTLSLDKLIGITKSKSNNPIFVALDGITDPHNLGAIIRSAEAFDCKGIIIPQRRSA
GLTGTVAKVAAGALEHIPVSRVVNLNRAIDELKKNGFLIVGLSGDGQIPISKFDQKAPIV
VVVGAENKGISLLTQKKCDYLLKIPLRGKTSSLNASVAAAISLCYLSNI
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Identical sequences A2BWS7
167542.P9515_10311 WP_011820339.1.83733 gi|123966264|ref|YP_001011345.1|

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