SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|123966693|ref|YP_001011774.1| from Prochlorococcus marinus str. MIT 9515

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  gi|123966693|ref|YP_001011774.1|
Domain Number 1 Region: 107-285
Classification Level Classification E-value
Superfamily alpha/beta knot 1.18e-34
Family SpoU-like RNA 2'-O ribose methyltransferase 0.001
Further Details:      
Domain Number 2 Region: 19-113
Classification Level Classification E-value
Superfamily L30e-like 2.24e-16
Family RNA 2'-O ribose methyltransferase substrate binding domain 0.009
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|123966693|ref|YP_001011774.1|
Sequence length 296
Comment tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str. MIT 9515]
Download sequence
Identical sequences A2BY06
WP_011820764.1.83733 167542.P9515_14601 gi|123966693|ref|YP_001011774.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]