SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for OGLUM07G04870.1 from Oryza glumaepatula 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  OGLUM07G04870.1
Domain Number 1 Region: 484-595
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.19e-16
Family B3 DNA binding domain 0.0025
Further Details:      
 
Domain Number 2 Region: 114-230
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.0000000000000615
Family B3 DNA binding domain 0.004
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) OGLUM07G04870.1
Sequence length 781
Comment pep:novel chromosome:ALNU02000000:7:4334426:4337091:-1 gene:OGLUM07G04870 transcript:OGLUM07G04870.1 description:""
Sequence
MAQPPDAAAAAVPPPVVIDRDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLL
SRLPDPIHPVPCTVADLVLDVDAESGEAYATISLLPGSHDDTTARRQVPAHGEPGFRFFE
KQLSPADVTSNALVLPAGAEHGLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRY
MLGDLGVNDNDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHP
RPGVEDNKVVSEVWLAMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGTTV
HLRMNPLQIAQSISGTVRTFDHLRPWRMLEVDWDQAASPISYRIHRQVNSWQVLRQPQPA
ATTSAVRIRDAIVATPQVQIMAPPRPPPPTTTTGMVPVIDHDIWLACATPYSGRLPVVGS
AVYYFPQGHAEQCHTCTTCLIPDNRHRLRCTSDDSYAMISLFPGDCYVTHRPLPAARDPV
GGQREFCFFDKKLSPSDVAANGGGSGALFVIPKPSAAEHVLPRIPDLRVTDLQGGRWEFG
HTWSDADTDRRSSSHTLAAGWSAFVKAKRLCVGDTVIFMRRRPGGEPLVGVRRKPHGGMP
VGIPDKHVADAWLDASSAQPFRVTYCPWQGTAEFVVRREEVDGSPPLAPGTRVRLLMNPD
DTRRRSQPPVYGTVRDVDSRSEWRMLEVDWDRDSPLAPTMNRRVNSWQVQPVQLALPPQG
SDEEAAAATTSTAHAGDATTSAPSLALQVQTMASSSSSSAPIIPSRGSAFRIVNPRDGSQ
G
Download sequence
Identical sequences A0A0E0AGK1
OGLUM07G04870.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]