SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|146295457|ref|YP_001179228.1| from Caldicellulosiruptor saccharolyticus DSM 8903

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|146295457|ref|YP_001179228.1|
Domain Number 1 Region: 390-424,457-726
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 1.09e-59
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.00015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|146295457|ref|YP_001179228.1|
Sequence length 727
Comment methyl-accepting chemotaxis sensory transducer [Caldicellulosiruptor saccharolyticus DSM 8903]
Sequence
MIMKKQSLQDMREKTSKVKEKKKIFIHGGLARKVIALILSILLIPIVIINMFSLRIAVSS
VLNESQKSYITAVSTASQYFQTIFKSAREQIMEIISNEIIQQLYSSSKQAGLSDNERRQI
KSNASKLLQNVLATNQMFSGVYLIADKERSLFLPYFPIEYLDFFKIKLTKWWKKITEKET
SFFIESLETSEPIILESHKEAFDEMAEKHSQKLAQYAFSVGIYFRDVTSDENTGVAILDI
SEAWLRETLQNNRLSKDGGYMLMVSPAGKIIIPSLWDVTMKSIPTSNTPFIFKVIHNTKK
GIMEGAFQTMFDGRFFLVTYAKIPEYEWIIVGMVPLNLIISSAKKLELIIVLLTVVFAII
AVVIGIYFVLKMTKDIEKIADIFAVAEKGDFTVEVNIRRRDEIGMLSQSFNKMVRNMKTL
VEKGIKLSNKIGYALNILNDMTTRTAIASNEVGGAIQNVAKGAESQAKEATRIVETIAKF
TEKIGEIVGAANKMKELSQNVLELSKKGSDTVSALGTVNTQTVNVTTELIKNIQQLSESS
LLIEKIIKFLSTISGETKLLALNASIEAARVGNTGSGFKVVASEIRKLADQSKESTREVE
VIVERVIEQTKDAQYVANKMEMIIEQQNEAVRKVAHAFEEIRGAIDQLFKEITKVTDSLE
MIDKEKGVILRSVENISAISQETAASTEEVLAATEEQLEAIERIREMAEQLNTLSKDLLE
AMKVFKI
Download sequence
Identical sequences A4XGK2
351627.Csac_0398 WP_011915991.1.85531 gi|146295457|ref|YP_001179228.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]