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Domain assignment for gi|146296494|ref|YP_001180265.1| from Caldicellulosiruptor saccharolyticus DSM 8903

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|146296494|ref|YP_001180265.1|
Domain Number 1 Region: 122-344
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 1.22e-32
Family Multidrug efflux transporter AcrB transmembrane domain 0.01
Further Details:      
 
Domain Number 2 Region: 823-1022
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 1.7e-20
Family Multidrug efflux transporter AcrB transmembrane domain 0.0081
Further Details:      
 
Domain Number 3 Region: 519-745
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 0.000000523
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|146296494|ref|YP_001180265.1|
Sequence length 1026
Comment MMPL domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903]
Sequence
MRVILKRPWLGTIIWAILTVIFVVTMPDINKIVRLKGEPKISQEYPSQVAAALEKEYQGV
PKDKKLSTVAIVFYDKNGLSNKDIEAIKKIIYGLDNSKERYNIENISTHFKNPELKNYYV
SSNNKVVLASIQADKSRREIIEIRNDIYKFIESVQKPKNLEVYLTGGDLITQDFVKASED
GVKKTDVITIIFIIIVLVLVFRSPVTPIVSLLTVGVSFLISLSIVGHLADKFNFPINTFT
RTFIVVSLFGIGTDYNLLIISRFREELANGKNVDDAILTTYKTAGKTVIFSCLTVFAGFS
AFAAASFNFFRAMTAIAISVLVLLLVLLTLVPTVLKIFGKNLLWPFNKEIHHTHSKLWET
AARLSTKYPYVVLTTVILILIPFLLSVRGDLSFNTLNELSEKYKSVKGFNIISKNFSSGK
TFPVTIYLKSNKNLATSDALSDIEKITEILSKQKGIKDVYSVTRPEGEIIKQFTLSNQAD
TVIKGIDSLRDGLLKVNNAIETINKNLNMSTKEFDVQKLVTGISQLENGVYELKISLEKL
NSGFEQGLNGSKKIYDGLNKLSIGSSKLSEGFKEFYFEYTRSINKVKSELQGFDVNQIEL
LLTGINTANNNLKALSNKYPEISRDINYIMASEILSKIETEANKFAPKLKEFSSEYEKIS
AQINEADKALKLISNSINSITSASKQLADAQGKVLSGYYQIDKGQKQIISGVNLMYSKLQ
EFDKQKEQILKKVDELQTGFTSLKSALLQISDALNKMANSMQSMKGYFEGYKTTNIFYVP
PEAIKSSSFKKALDSYMNKDRTITKIILILDTNPYTNKAIDIVDNVEKVLNNSLEFINTK
FVSVGVGGISSSNHDLKSIYFKDFKTLRLIMIISIFILMFIISRSIFNAAIMVVIVFVDY
YLALSITEMIFKGIFEYEALNWAVPFFTFVVFLALGIDYSVFLLIRFYEYRNLELSEALK
LTSANIGHVVTSAVIILAGTFAAMLPSGILTLMQVSICVVIGLVLLAFFLLPFLYNSLMR
IKRDVI
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Identical sequences A4XJI9
351627.Csac_1474 gi|146296494|ref|YP_001180265.1| WP_011917010.1.85531

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