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Domain assignment for gi|479205014|ref|YP_007833605.1| from Roseburia intestinalis

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|479205014|ref|YP_007833605.1|
Domain Number 1 Region: 83-337
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.75e-39
Family L-arabinose binding protein-like 0.00055
Further Details:      
 
Domain Number 2 Region: 8-66
Classification Level Classification E-value
Superfamily lambda repressor-like DNA-binding domains 1.75e-17
Family GalR/LacI-like bacterial regulator 0.0052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|479205014|ref|YP_007833605.1|
Sequence length 337
Comment transcriptional regulator, LacI family [Roseburia intestinalis M50/1]
Sequence
MDKGLEKNITIADVAEALGVSKTTVSRAISGKGRIGRETRERVLAYIEEHDYKPNVIAKG
LAQSKTYNICVVMPGEYDVVDLTFFQECLFGIQEIAGSMEYDILLSICRKNDISSLERII
ANHKVDGVILMRTFVEDEQIDFLQTKNVPFVTIGSTSANYKGVIQIDHNHKSACKELTSI
ILMKQMDKIALIGGNEEHVVTQSRLRGFREAYAKMGKTLDVDLMFLSQDNQVLVEKAVKE
ALNRQADCILCMDDAVCSRVLKTLRQQHVKVPEDVRVASFYNSMVLENNVPSITSLSFDA
KELGMVACRTLLDLTEGLEVKERTLLPYEVVLKESTK
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Identical sequences D4KJN4 D4L0F0
gi|479148438|ref|YP_007778867.1| gi|479205014|ref|YP_007833605.1|

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