SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|126451593|ref|YP_001067208.1| from Burkholderia pseudomallei 1106a

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|126451593|ref|YP_001067208.1|
Domain Number 1 Region: 265-791
Classification Level Classification E-value
Superfamily Formate dehydrogenase/DMSO reductase, domains 1-3 5.76e-191
Family Formate dehydrogenase/DMSO reductase, domains 1-3 0.00000000294
Further Details:      
 
Domain Number 2 Region: 804-946
Classification Level Classification E-value
Superfamily ADC-like 9.04e-42
Family Formate dehydrogenase/DMSO reductase, C-terminal domain 0.0016
Further Details:      
 
Domain Number 3 Region: 121-258
Classification Level Classification E-value
Superfamily 4Fe-4S ferredoxins 6.28e-37
Family Ferredoxin domains from multidomain proteins 0.0033
Further Details:      
 
Domain Number 4 Region: 48-120
Classification Level Classification E-value
Superfamily 2Fe-2S ferredoxin-like 3.99e-19
Family 2Fe-2S ferredoxin domains from multidomain proteins 0.0088
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|126451593|ref|YP_001067208.1|
Sequence length 984
Comment formate dehydrogenase subunit alpha [Burkholderia pseudomallei 1106a]
Sequence
MTSSAFDSSRQGCGSGQCACRRAAQTRRADPFDDTDYGTPTRHADTDVTLDIDGRAVTVP
AGTSVMRAAIEAGINVPKLCATDSLEPFGSCRLCLVEIEGRRGYPASCTTPVEAGMKVRT
QSDRLQALRRNVMELYISDHPLDCLTCAANGDCELQDMAGAVGLREVRYGFDGKNHLSDA
KDESNPYFSYDPSKCIVCNRCVRACEETQGTFALTIASRGFESRVAASACEAFMDSECVS
CGACVAACPTATLIEKSVARLGQPEHEIVTTCAYCGVGCALKAEMKGEQVVRMTPHKNGL
ANEGHACVKGRFAWGYATHKDRITKPMIREKITDAWREVSWDEAIGYAAARFRRIQDEHG
RDSIGGITSSRCTNEETYLVQKLVRAAFGNNNVDTCARVCHSPTGYGLKTTLGESAGTQT
FASVGSADVIVVIGANPTDGHPVFGSRLKRRVREGAQLIVVDPRRIDLVDGPHVKAVHHL
QLRPGTNVALVNALAYVIVTEGLVDEAFVAERCEPHAFDVWRAFAARPENSPEATADITG
VPADAVRAAARLYATGGRAAIFYGLGVTEHAQGSTMVMGIANLAMATGNLGIEGAGVNPL
RGQNNVQGSCDMGSFPHELPGYRHIGDAAVRARFDEAWSTTLQPEPGLRIPNMFDAALDG
SFKGLYCQGEDIVQSDPNTQHVAAALASLDCLVVQDIFLNETAKYAHVFLPGATFLEKDG
TFTNAERRISRVRRAMRPLSGYADWEVTLMLSRALGYDMHYAHPSEIMDEIARLTPTFAG
VSYALLDELGSVQWPCNDAAPQGTPTMHVDQFVRGKGKFVITQYIASPEKVTPRYPLILT
TGRILSQYNVGAQTRRTENVRWHGEDRLEIHPHDANDRGIRTGDWVGVASRAGQTVLRAL
VTERMQPGVVYTTFHFPESGANVITTDSSDWATNCPEYKVTAVQVAPVAQPSEWQRAYTR
FRAEQLALLEQRTAERAPAIATGK
Download sequence
Identical sequences A3NXY7
357348.BURPS1106A_2964 gi|403519630|ref|YP_006653764.1| gi|126451593|ref|YP_001067208.1| WP_004535378.1.10907 WP_004535378.1.12856 WP_004535378.1.13639 WP_004535378.1.16249 WP_004535378.1.16689 WP_004535378.1.27069 WP_004535378.1.29335 WP_004535378.1.29853 WP_004535378.1.29887 WP_004535378.1.33157 WP_004535378.1.36666 WP_004535378.1.37690 WP_004535378.1.38490 WP_004535378.1.3872 WP_004535378.1.39162 WP_004535378.1.39179 WP_004535378.1.39757 WP_004535378.1.42408 WP_004535378.1.43136 WP_004535378.1.43786 WP_004535378.1.46757 WP_004535378.1.48464 WP_004535378.1.52229 WP_004535378.1.52643 WP_004535378.1.53048 WP_004535378.1.54016 WP_004535378.1.54859 WP_004535378.1.5608 WP_004535378.1.57247 WP_004535378.1.59422 WP_004535378.1.60810 WP_004535378.1.61084 WP_004535378.1.64383 WP_004535378.1.67860 WP_004535378.1.70278 WP_004535378.1.71901 WP_004535378.1.72015 WP_004535378.1.72817 WP_004535378.1.74425 WP_004535378.1.75711 WP_004535378.1.766 WP_004535378.1.77689 WP_004535378.1.80433 WP_004535378.1.82394 WP_004535378.1.83357 WP_004535378.1.83543 WP_004535378.1.83688 WP_004535378.1.85412 WP_004535378.1.86806 WP_004535378.1.87278 WP_004535378.1.88237 WP_004535378.1.91025 WP_004535378.1.98547 WP_004535378.1.98768 WP_004535378.1.9962

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]