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Domain assignment for gi|116623277|ref|YP_825433.1| from Candidatus Solibacter usitatus Ellin6076

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|116623277|ref|YP_825433.1|
Domain Number 1 Region: 11-383
Classification Level Classification E-value
Superfamily Homocysteine S-methyltransferase 6.54e-110
Family Homocysteine S-methyltransferase 0.00000757
Further Details:      
 
Domain Number 2 Region: 900-1178
Classification Level Classification E-value
Superfamily Methionine synthase activation domain-like 3.79e-80
Family Methionine synthase SAM-binding domain 0.00025
Further Details:      
 
Domain Number 3 Region: 341-606
Classification Level Classification E-value
Superfamily Dihydropteroate synthetase-like 1.31e-74
Family Methyltetrahydrofolate-utiluzing methyltransferases 0.00071
Further Details:      
 
Domain Number 4 Region: 743-880
Classification Level Classification E-value
Superfamily Cobalamin (vitamin B12)-binding domain 5.63e-39
Family Cobalamin (vitamin B12)-binding domain 0.0000527
Further Details:      
 
Domain Number 5 Region: 656-740
Classification Level Classification E-value
Superfamily Methionine synthase domain 1.96e-23
Family Methionine synthase domain 0.0006
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|116623277|ref|YP_825433.1|
Sequence length 1185
Comment methionine synthase [Candidatus Solibacter usitatus Ellin6076]
Sequence
MTNFLERQKALNDSLEQRVLVLDGAMGTMIHQAPLSIETDYLGRENCPEILNVTRPDVIQ
DIHRQYLEAGADIIETNTFGGTRIALADNKLEERAYELNFAAAKLAREVADQFSTAAKPR
FVAGSIGPTNKDLNITGSTTFPEIKAAYYEQAKGLVEGGADYLLIETCFDTGSLKAGLVA
VEQLGRELAIQIPVVASVTIERTGTMLGGQQIDALYASIGNHELLGVGMNCATGPDLMTD
HIRTLNEMSAHRISCYPNAGLPNAEGKFGETPDSLAAQLEKFANQGWLNFVGGCCGTTPA
HIQAIAQMIQGKRPRATPASKHRAYYSGIDLVEAEDSNRPLLVGERTNVIGSRLFKNLIA
DEKWEEATDIARRQVRNGAHVIDVCLQSTDREELEDIRPFYEKLIRKIKAPIMIDTTDPK
AVELALTYCQGKSIINSVNLEDGEEKFERLCPIAKLYGAALVVGSIDEDKLQAQAFTRER
KVAVAERSYRLLTEKYGIPGEDIIIDPLVFPCATGDVNYIGGAVETIEGIRLVKQALPYA
KTVLGISNISFGLPAAAREVVNSVFLYYCTKAGLDLAIVNAEKLERFASIPEEERRLAEH
LLFNTPPAGAEDESLRTAAEDWRAQSPEQKAAINQFHIAAIAEHFRKAGARVKKAAADMP
LDQRLANYIIEGTKDGLIADLDRKRAEGATPLEIINGPLMAGMSEVGRLFNNNELIVAEV
LQSAEAMKAAVNHLEQFMEKADTAARGKVLLATVKGDVHDIGKNLVEIILANNGYEVINL
GIKVPPDVLIQAFREHMPDAIGLSGLLVKSTQQMVITATDLKAAGIDVPLLVGGAALSEK
FTRTKIGPAYSEAVCYAKDAMTGLSLMNRLMDPAEREALIATSTTLEAPAAVEAPAEPLG
PLSTRRSRKVRTELPVPPAPYLERKVRDVPNLADVWSYINPFMIYGRHLGYKGNFEKALA
EHEEKALELFHNVEELKHEAAQFMHVKAVWQFFEAERDGNAIHLFAPGGASPIHTFRFGR
QRREDGLCLSDYILDSPDGKRDHLALFVTTAGAGIRERSEQWKKAGEFFKAHAIQALAIE
TAEATAEWLHRRIREDWGFPDPPTTTMHDRFTSKYHGKRYSFGYPACPNLDDQQGVWKLI
NPDDIGVKLTEGMMMEPEASVSAIVFHHPDCAYFTADEGESEATA
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Identical sequences Q01YW7
WP_011685902.1.46729 gi|116623277|ref|YP_825433.1| 234267.Acid_4184

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