SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|557694560|ref|YP_008797614.1| from Candidatus Caldiarchaeum subterraneum

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|557694560|ref|YP_008797614.1|
Domain Number 1 Region: 1-253
Classification Level Classification E-value
Superfamily Acyl-CoA dehydrogenase NM domain-like 2.23e-49
Family Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 0.00028
Further Details:      
 
Domain Number 2 Region: 240-402
Classification Level Classification E-value
Superfamily Acyl-CoA dehydrogenase C-terminal domain-like 1.51e-38
Family Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 0.00025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|557694560|ref|YP_008797614.1|
Sequence length 406
Comment acyl-CoA dehydrogenase [Candidatus Caldiarchaeum subterraneum]
Sequence
MDFRLNSEQQLLRDKVSEFCKRVIEPKWIEVDDKGEIDREIIEKMAEVGLMGMTISSEYG
GQDGSFLEAALAAEQLAYHGPALSIAVMYLLQCSWPYIIQRYGSEEAKQEVLPRVAAGDA
AIGIASTEAHGGSDVSSVQVRAERKGDGKWLISGEKSMVSLPSVIERMPWGGGWFLIARS
GDPGLKHRTITDFLLLMKRNGVLTKGISYKPWTEFARRGLDTSVLTFQNVEVDDVYRVGE
VNGGFKIAMEGFNLARTMIGAVCVGCAEWLMERAVEWVRTRKVFGKPIAAYQGVSFKIAE
FASALEAAKLLSYKAAWIADRYYRDGVGTLGDVAKLGAMAKLRCASLAVDIGEEVMKIYG
GASYFKETPIFRAWLAAFSYVVGAEGAENILKLIVAREVIGRDFIE
Download sequence
Identical sequences E6PAM3
gi|557694560|ref|YP_008797614.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]