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Domain assignment for gi|116872835|ref|YP_849616.1| from Listeria welshimeri serovar 6b str. SLCC5334

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|116872835|ref|YP_849616.1|
Domain Number 1 Region: 257-556
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain III 3.66e-91
Family DNA repair protein MutS, domain III 0.000000686
Further Details:      
 
Domain Number 2 Region: 559-791
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.78e-64
Family ABC transporter ATPase domain-like 0.00000077
Further Details:      
 
Domain Number 3 Region: 2-112
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain I 5.62e-42
Family DNA repair protein MutS, domain I 0.0000285
Further Details:      
 
Domain Number 4 Region: 114-269
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain II 7.06e-32
Family DNA repair protein MutS, domain II 0.0012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|116872835|ref|YP_849616.1|
Sequence length 860
Comment DNA mismatch repair protein MutS [Listeria welshimeri serovar 6b str. SLCC5334]
Sequence
MTEYTPMIKQYLEIKDKYQDAFLFFRLGDFYEMFFEDALNASQILEITLTGREGGTKEKI
PMCGVPYHSASGYIDTLIEKGYKVAICEQVEDPKTTKGMVKREVVQLISPGTVMDERGLK
AKENNYIASLYCYEGKEYGFAYSDLSTGELKSTVIEASEDRLINELTTLSTRELIVSESE
KTVLSDVMKEQLGLTFSVHEEDTIPSENEKLVTRHMSLSEKRAIGKLLHYLKETQKRDLG
HLQQAVHYETSNYMKMDYYSKRNLELAESIRGKGRQGTLLWLLDNTQTAMGGRMLKQWID
RPLIDRKKIIERQNDVSELMANFFERLELVENLKNVYDLERLAGRVAYGNVNARDLIQLR
NSLYQIPRIRATLLSMNSKSLTELANQLDPCEQLTEKLEEAIMDSAPISIREGGIIKDGY
NSQLDTYRDASRNGKTWIAELERKERELTGIKTMKVGFNRVFGYYIEVTRANTHLLPEGR
YERKQTLTNAERYITPELKEKEKLILDAEEKSMELEYLLFTEVREMVKDYIERLQKLAKS
VSEIDCLQSFADISEKNHFIRPTLSEDGSLHVKQGRHPVVEKVMGAQSYVANDCDLDENR
EILLITGPNMSGKSTYMRQVALTAICAQVGCFVPAEEATLPIFDQIFTRIGAADDLIAGQ
STFMVEMLEARNAIVHATKDSLILFDEIGRGTATYDGMALAQAIIEYIHENVHAKTLFST
HYHELTDLEKELRGLQNIHVSAVEENGKVVFLHKIKEGPADKSYGIHVAELAELPKSLIE
RASRILEQLENENKKIIITNEKQPEEIHEEVQLSMFPVEPEKKTSSKETKLIKEIASMNI
MQMTPMDAMNKLYELQSKIH
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Identical sequences A0AIK5
386043.lwe1419 WP_011702215.1.63932 gi|116872835|ref|YP_849616.1|

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