SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|150377033|ref|YP_001313629.1| from Sinorhizobium medicae WSM419

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|150377033|ref|YP_001313629.1|
Domain Number 1 Region: 5-244
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.53e-83
Family ABC transporter ATPase domain-like 0.000000351
Further Details:      
 
Domain Number 2 Region: 237-356
Classification Level Classification E-value
Superfamily MOP-like 7.78e-26
Family ABC-transporter additional domain 0.0062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|150377033|ref|YP_001313629.1|
Sequence length 383
Comment ABC transporter-like protein [Sinorhizobium medicae WSM419]
Sequence
MTLQIELNGVNKFYGSYHALKNIDLAIEEGTFVALVGPSGCGKSTLLRSLAGLEKISAGE
MKIAGARMNDVPPRKRDVAMVFQSYALYPHMTVEENLTYSLRIRGVKKAEALRAAAEVAT
TTGLSHLMKRYPRELSGGQRQRVAMSRAIIRHPKAFLFDEPLSNLDAALRVHMRKEIRAL
HDRLGATSVYVTHDQIEAMTMADHVVVMRDGIIEQQGRPLDLYDRPANRFVAGFIGSPAM
NFIPAVVEQDGRHLALDLGATQARLALVETVPAGASVTVGIRPEHIRIVGAGQGALDIPV
GVVESTGSATYITSATQPELMVVETGRSAAVGGELIGLAIDPAQLHLFDAETGNRLGIGR
AHESEKFAPRAAPHPAAATFSPS
Download sequence
Identical sequences A6UJ66
366394.Smed_4913 gi|150377033|ref|YP_001313629.1| WP_012061824.1.29075 WP_012061824.1.31871 WP_012061824.1.61285 YP_001313629.1.44884 gi|150377033|ref|YP_001313629.1|NC_009620

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]