SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|150395705|ref|YP_001326172.1| from Sinorhizobium medicae WSM419

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|150395705|ref|YP_001326172.1|
Domain Number 1 Region: 9-223
Classification Level Classification E-value
Superfamily FAD-binding/transporter-associated domain-like 8.33e-69
Family FAD-linked oxidases, N-terminal domain 0.014
Further Details:      
 
Domain Number 2 Region: 198-474
Classification Level Classification E-value
Superfamily FAD-linked oxidases, C-terminal domain 8.67e-58
Family D-lactate dehydrogenase 0.076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|150395705|ref|YP_001326172.1|
Sequence length 477
Comment FAD linked oxidase domain-containing protein [Sinorhizobium medicae WSM419]
Sequence
MTISLPSPELIASFAEIVGPANALTAPADAAPYLVESRGLYRGTTPLVLRPGTVEEVSLI
MRLASQTRTAVVPQGGNTGHVAGQIPREGKADVVLSLERLNRIRDIDPVGNVIVADAGCI
LEDIQKAADDVDRLFPLSLGSEGSARIGGNLSTNAGGTAVLAYGNMRQLCLGLEVVLPTG
EIWDGLRRLKKDNTGYDLRDLFIGAEGTLGVITGAVLKLYPKPRGHQVAFAGLRSVEDAL
MLFDRASSLCGPALTGFELMPRLGIEFTTRHIAGVRDPMETTHPWYALIDISTSDSADGA
ERMVQDLLEAGIADGLVENAVIAQNEAQRKALWHMRESMSPAQKPEGGSIKHDISVPVSS
VPVFMAEADALVSKAIPGARICAFGHMGDGNIHYNISQPVGADKQSFLDRWREINAIVHA
VVLKHDGSISAEHGIGQLKRDELAAIRSTIEIDLMRRIKHAFDPAGIMNPDKVLRED
Download sequence
Identical sequences A6U6Q7
366394.Smed_0480 gi|150395705|ref|YP_001326172.1| WP_011974683.1.7720 WP_011974683.1.89664 YP_001326172.1.44884

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]