SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|150397267|ref|YP_001327734.1| from Sinorhizobium medicae WSM419

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|150397267|ref|YP_001327734.1|
Domain Number 1 Region: 4-242
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.92e-87
Family ABC transporter ATPase domain-like 0.000000217
Further Details:      
 
Domain Number 2 Region: 236-349
Classification Level Classification E-value
Superfamily MOP-like 8.26e-29
Family ABC-transporter additional domain 0.0061
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|150397267|ref|YP_001327734.1|
Sequence length 349
Comment ABC transporter-like protein [Sinorhizobium medicae WSM419]
Sequence
MASVEIQSVKKFYGALQALHGVSIQIEDGEFVTLVGPSGCGKSTLLRMLAGLEEISSGTI
RIGAAVVNDLPPKDRDIAMVFQNYALYPHMTVAENMGFALKLKNADKGEIRSKVERAANI
LNLDKLLDRYPRQLSGGQRQRVAMGRAIVRAPKVFLFDEPLSNLDATLRVSMRAEIKSLH
QRLGTTIVYVTHDQVEAMTMADKIVVMRDGIVEQVGAPLELYDRPSNMFVAGFIGSPAMN
FLTGDIRANGFMTGTCLFPIGENRPDLHGRSAVYGIRPEHLRISEDGIPAEVQLVEPTGS
ESHLIVKIADQAITCVVRDRVDVRPGDLIRLSPDADRVHLFDPDGENRL
Download sequence
Identical sequences A6UB69
366394.Smed_2066 WP_011976196.1.7720 YP_001327734.1.44884 gi|150397267|ref|YP_001327734.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]