SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|150397555|ref|YP_001328022.1| from Sinorhizobium medicae WSM419

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|150397555|ref|YP_001328022.1|
Domain Number 1 Region: 4-242
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.96e-86
Family ABC transporter ATPase domain-like 0.000000172
Further Details:      
 
Domain Number 2 Region: 236-329
Classification Level Classification E-value
Superfamily MOP-like 9.23e-25
Family ABC-transporter additional domain 0.0043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|150397555|ref|YP_001328022.1|
Sequence length 333
Comment ABC transporter-like protein [Sinorhizobium medicae WSM419]
Sequence
MGSITLKNVSKVFGAHAVIPSIDLDITDGEFVVFVGPSGCGKSTLLRLIAGLEDVSDGEI
VIDGRNATELPPAKRGLSMVFQSYALYPHMSVRSNIAFPLKMAGEDKATIDKKVQDAARV
LNLTDYLDRKPRQLSGGQRQRVAIGRAIVRQPGAFLFDEPLSNLDAALRVNMRLEISQLH
QQLKTTMVYVTHDQVEAMTMADKIVVLNRGRIEQVGSPLDLYRRPDNLFVAGFIGSPRMN
FISGAPAADHGAHTIGIRPEHIALSTDQGIWRGTVGVAEHLGSDTFLHVNADGIGTLTAR
VGGDFAVTHGDQVFLTPDPQHLHRFDEKGMAIR
Download sequence
Identical sequences A6UC07
WP_012066578.1.29075 WP_012066578.1.31871 WP_012066578.1.7720 WP_012066578.1.89664 YP_001328022.1.44884 366394.Smed_2355 gi|150397555|ref|YP_001328022.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]