SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|150397623|ref|YP_001328090.1| from Sinorhizobium medicae WSM419

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|150397623|ref|YP_001328090.1|
Domain Number 1 Region: 4-242
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 5.96e-84
Family ABC transporter ATPase domain-like 0.000000268
Further Details:      
 
Domain Number 2 Region: 236-354
Classification Level Classification E-value
Superfamily MOP-like 1.6e-25
Family ABC-transporter additional domain 0.006
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|150397623|ref|YP_001328090.1|
Sequence length 354
Comment ABC transporter-like protein [Sinorhizobium medicae WSM419]
Sequence
MASIDIANIKKSYGTHPVLHDVDLKISDGEFVVLVGPSGCGKSTLLRMIAGLESVTGGEI
RIAGRRVNDLAPKDRDIAMVFQSYALYPHMSVAKNMSYSLRLRKTAKDRIATVVAGAAAK
LGLDPLLERRPRALSGGQRQRVAMGRAIVRQPKAFLFDEPLSNLDARLREQMRAEIKKLH
KDLGATSIYVTHDQIEAMTLADRIVAMNGGVVQQVGSPLDLYDRPANLFVAGFIGSPGMN
FFEGNYQAGEVQRFEMEDGNSIPLDAPPLSNNARVTLGIRPEHVVLAGHGPETLLATVDL
VEPTGFGIILHLSLGGASFKAFTNDRSFLTASGTIPVRFPAHYLHFFDAEGRRV
Download sequence
Identical sequences A6UC75
WP_012066646.1.29075 WP_012066646.1.61285 WP_012066646.1.7720 WP_012066646.1.89664 YP_001328090.1.44884 366394.Smed_2423 gi|150397623|ref|YP_001328090.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]