SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|150397771|ref|YP_001328238.1| from Sinorhizobium medicae WSM419

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|150397771|ref|YP_001328238.1|
Domain Number 1 Region: 2-199,300-385
Classification Level Classification E-value
Superfamily Zn-dependent exopeptidases 1.48e-84
Family Bacterial dinuclear zinc exopeptidases 0.0000727
Further Details:      
 
Domain Number 2 Region: 185-298
Classification Level Classification E-value
Superfamily Bacterial exopeptidase dimerisation domain 2.88e-32
Family Bacterial exopeptidase dimerisation domain 0.0000832
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|150397771|ref|YP_001328238.1|
Sequence length 387
Comment amidohydrolase [Sinorhizobium medicae WSM419]
Sequence
MPILNRAADLKTEVTEWRRHLHQNPELLFAVENTAAFVERKLKEFGVDEIVTGLGRTGVV
GLIRGNRGPGRTIGLRADMDALPITEASGMAWTSKTPGKMHACGHDGHTAMLLGAAKYLA
ETRNFAGNVAVIFQPAEEGGGGGNEMVKDGMMERFAIEEVYGMHNMPGMPVGHFGSRVGP
IMASTDEFTITVKGRGGHAAQPHRTIDPIAIGAQIVNALQTIASRTVDPLASIVVSVTKF
NAGFAHNVIPEQATLAGTVRALTPEVRDIGEVRIRQIAESIALAYGATVDIWYGRNYPVT
VNHAAETGHALAVAATVAGEGNVDEALDPLMGGEDFSYMLLSRPGAFVFIGNGDTAGLHH
PAYDFNDEVIPHGISYWVKLAEARLAA
Download sequence
Identical sequences A6UCM3
gi|150397771|ref|YP_001328238.1| 366394.Smed_2573 WP_012066794.1.7720 YP_001328238.1.44884

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]