SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|119774160|ref|YP_926900.1| from Shewanella amazonensis SB2B

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|119774160|ref|YP_926900.1|
Domain Number 1 Region: 106-282
Classification Level Classification E-value
Superfamily ClpP/crotonase 4.59e-22
Family Clp protease, ClpP subunit 0.058
Further Details:      
 
Domain Number 2 Region: 458-517
Classification Level Classification E-value
Superfamily NfeD domain-like 0.000000719
Family NfeD domain-like 0.0071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|119774160|ref|YP_926900.1|
Sequence length 529
Comment membrane-bound serine protease [Shewanella amazonensis SB2B]
Sequence
MFNRLFNRLFSPEVVRLLASINRLFASKPGLFALLLPLLLGSLNSGVVASPHAAFSSGFI
LSNANIANTTPVSDRDIGSNHSADLAAAVTSHQNTGARGLEGTVAPIWLLEVKGAIGPGV
ADYLVRTLNKAQKQVVPPQLLLLTLDTPGGLVASLRDINQAILTSEIPVACLVYPAGARA
ASAGTYMLYACHLAAMAPATSLGAATPVQLGPPAGGEPKDKEAEQQGASDMERKILNDAV
AYIRTLAQLRGRNAEWGEQAVREAATATASEALALGAIDLIAKDPYALLEAIDGRQFVIN
DTVRVLHTHKALLLDAKPDWRTTFLSTITNPNVAYVLMMLGIYGLLLEFYSPGMGISGVV
GAICLLVAMFALQMLPINYAGAALLILGIGLLVAESLVPSFGILGFGGVVAFVLGSVFLI
DSELDAFRIAWPVILALAMVSLLFFAVLVSLLFKQRHRAVVSGPEAMVGARALVLDGFPG
KGQVLFMGERWQGHSEQALQSGTWVRVESISGLLLELGPLDESKEKQDE
Download sequence
Identical sequences A1S4C4
gi|119774160|ref|YP_926900.1| WP_011759139.1.25267 326297.Sama_1023

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]