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Domain assignment for gi|110680295|ref|YP_683302.1| from Roseobacter denitrificans OCh 114

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|110680295|ref|YP_683302.1|
Domain Number 1 Region: 6-194
Classification Level Classification E-value
Superfamily Methylesterase CheB, C-terminal domain 1.44e-55
Family Methylesterase CheB, C-terminal domain 0.00013
Further Details:      
 
Domain Number 2 Region: 274-467
Classification Level Classification E-value
Superfamily S-adenosyl-L-methionine-dependent methyltransferases 7.57e-43
Family Chemotaxis receptor methyltransferase CheR, C-terminal domain 0.00029
Further Details:      
 
Domain Number 3 Region: 948-1074
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.0000000000000279
Family N-terminal PAS domain of Pas kinase 0.067
Further Details:      
 
Domain Number 4 Region: 213-275
Classification Level Classification E-value
Superfamily Chemotaxis receptor methyltransferase CheR, N-terminal domain 0.00000000000589
Family Chemotaxis receptor methyltransferase CheR, N-terminal domain 0.0051
Further Details:      
 
Domain Number 5 Region: 847-950
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.00000655
Family Heme-binding PAS domain 0.065
Further Details:      
 
Domain Number 6 Region: 716-826
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.0000176
Family Heme-binding PAS domain 0.047
Further Details:      
 
Weak hits

Sequence:  gi|110680295|ref|YP_683302.1|
Domain Number - Region: 639-713
Classification Level Classification E-value
Superfamily Tropomyosin 0.000347
Family Tropomyosin 0.0041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|110680295|ref|YP_683302.1|
Sequence length 1084
Comment regulatory protein [Roseobacter denitrificans OCh 114]
Sequence
MKDENKDITIIGIGSSAGGLEAIRELVATLPTNMNVAYVVVQHMSPHHKSLMTELVARQT
SLSVKDVKDGILPEPNVIYVTPPNTDIIYDDGKLRLIEPSHEVASPKPSVDRFLLSLADQ
HGESAMAIILSGTGTDGAYGVQAIREAGGITIAQDTESAKYDGMPMSAMQTGCVDLVLRP
FEIGTHLQKILSSARDFDAFRQETSDTSPALDLLQILLARTRVDFREYKQTTINRRIERR
MVALGIETHAEYTQFCRENPNAVDALFKDLLISVTRFFRDKSEFEQLKEMLPALLKKKET
RPFRVWIAGCATGEEAYSIAMLLSEALGGPTVNLKDHVQIFATDIDKEALDVARKGVYGM
AALNDIPKTLSDRYFMTQNDGIRVIDSLRSAILFSDHNVCQDPPFQKVDLLCCRNLLIYF
GNALQHKVMSRFHYAMTDNSLMFLGTAETVAGSDEMFVQDSHSAHIYRRRSIRRSDQNVF
SNPRNLPQSRSKVPAPAKQGQEQGQSTDRQMFEALALALGKNSVLVTDDYGIIRVYGNVS
PFIEMNETSNLKMHIDLLRRPFREEARSLVTLALKHGEHRSGVRHLLAEDDDAEIRLDVY
PIVARDINERAALVVFSEMKVDRSKAAGTSEVDEDTVFESDRIRLLEDEVATTREALQQT
IEELETSNEELQSLNEELQSTNEELQATNEELETSNEELQSTNEELITVNEELQVTAAEL
SGRTGELMSVLETAPLSIMVLDTALQISQATNAACDMFSLARPVSNPHVSQCVLPNNFPP
LAPICNETLKLGEPISKEFNSGGSRYKLTSSPFFDMRGQMKGVTIVISAFPGLAQELELI
LDHGELYMLNRAQDGTILRISEKSARFFGTTRNKAEGANFYNLVSRSISNTIREHDARLM
KAEGGHLRDMLRLRSVEDNTEICLNSENFLFDNLAGGEASIYTIGQDISEVIETRDKAEE
SLAQLILLQEIARIGFWSLDLENDKVFWSEEVYRIHGKDPDTFSPKLEDGLSFYHPDDRK
TVQAEVEKVRTLGGEFHFKMRIINADGETVPVESFGLARQDMHGNIGKIIGVFRVCEDEG
PTTH
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Identical sequences Q164H7
375451.RD1_3107 WP_011569232.1.1045 WP_011569232.1.29122 gi|110680295|ref|YP_683302.1|

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