SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|148273258|ref|YP_001222819.1| from Clavibacter michiganensis subsp. michiganensis NCPPB 382

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|148273258|ref|YP_001222819.1|
Domain Number 1 Region: 91-184
Classification Level Classification E-value
Superfamily Apolipoprotein 0.0000000314
Family Apolipoprotein 0.0086
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|148273258|ref|YP_001222819.1|
Sequence length 302
Comment hypothetical protein CMM_2076 [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Sequence
MINRLLFLAGIGTGYVLGARAGRKRYEGIARTSRSVWSSEPVQRGVRQAQTVLDEKGPVV
VERTVETAREVADFVGHAVQGAAVAVGRTAHTVGERIGTTTQDVAGRVGSTTQDIAGRVG
DTAKDLGTRTADQTKHVVDRVGQQATEVGHRVAETAEDVRDRVVETAEEARTRVQATAED
LRERGEEAGRRAVFTAAEARDEALASFDDEDETGPVPIPRDGAPDEAPAPAEPVAAAPAP
AKPKAAAKKPAPKPKAAPKASDAPHVPTPGDIAGSVHREEPAHAPADDATGTTPARTSGD
EA
Download sequence
Identical sequences A5CSR9
gi|148273258|ref|YP_001222819.1| WP_012038764.1.80587 443906.CMM_2076

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]