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Domain assignment for gi|118475004|ref|YP_892560.1| from Campylobacter fetus subsp. fetus 82-40

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|118475004|ref|YP_892560.1|
Domain Number 1 Region: 120-397
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.74e-67
Family RecA protein-like (ATPase-domain) 0.0000000504
Further Details:      
 
Domain Number 2 Region: 78-151
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 4.57e-22
Family Cold shock DNA-binding domain-like 0.00044
Further Details:      
 
Domain Number 3 Region: 30-76
Classification Level Classification E-value
Superfamily Rho N-terminal domain-like 0.000000000549
Family Rho termination factor, N-terminal domain 0.007
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|118475004|ref|YP_892560.1|
Sequence length 444
Comment transcription termination factor Rho [Campylobacter fetus subsp. fetus 82-40]
Sequence
MENKDNAQSHQSSSGAKKQHTRTHIPVDGYKIEELRQLDLDSLVAIANEVGVENPREFRR
QELVFEILKAQTKQGGFILFTGILEIVGDGYGFLRATDANLSDSANDTYVSQSQIKKFAL
RVGDIITGQVREPREQEKYYALLKIEAINYKSIAEAKERPLFDNLTPLFPNEKIKLEYDP
MKLTGRVLDLFTPIGKGQRGLIVAPPRTGKTELMKELAHGITRNHPEMELIVLLIDERPE
EVTDMQRSVKGEVFSSTFDLPAINHVRVAELVIEKAKRSVEMGKNVVILLDSITRLARAY
NTVTPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATALIDTGSRMDDVIFEE
FKGTGNSEIVLDRTISDRRIYPAVNILKSGTRKDELLQGPDDLGKIWAIRNIIATMDDIE
ALKFLYSKMLKTRDNKELLSIMNE
Download sequence
Identical sequences A0A0E1GN49 A0RQS7 W0DBW4
gi|118475004|ref|YP_892560.1| 360106.CFF8240_1421 WP_002850294.1.1289 WP_002850294.1.1469 WP_002850294.1.16919 WP_002850294.1.17016 WP_002850294.1.36062 WP_002850294.1.38168 WP_002850294.1.39057 WP_002850294.1.41035 WP_002850294.1.42553 WP_002850294.1.42882 WP_002850294.1.44411 WP_002850294.1.46075 WP_002850294.1.46714 WP_002850294.1.48558 WP_002850294.1.51765 WP_002850294.1.5603 WP_002850294.1.59303 WP_002850294.1.60351 WP_002850294.1.62614 WP_002850294.1.63275 WP_002850294.1.68475 WP_002850294.1.71429 WP_002850294.1.74407 WP_002850294.1.77129 WP_002850294.1.77394 WP_002850294.1.81562

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