SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|125624962|ref|YP_001033445.1| from Lactococcus lactis subsp. cremoris MG1363

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|125624962|ref|YP_001033445.1|
Domain Number 1 Region: 211-403
Classification Level Classification E-value
Superfamily PheT/TilS domain 1.12e-65
Family B3/B4 domain of PheRS, PheT 0.00000642
Further Details:      
 
Domain Number 2 Region: 473-691
Classification Level Classification E-value
Superfamily Class II aaRS and biotin synthetases 3.98e-45
Family Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 0.00056
Further Details:      
 
Domain Number 3 Region: 40-197
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 3.43e-39
Family Myf domain 0.0044
Further Details:      
 
Domain Number 4 Region: 700-797
Classification Level Classification E-value
Superfamily Anticodon-binding domain of PheRS 3.79e-30
Family Anticodon-binding domain of PheRS 0.00058
Further Details:      
 
Domain Number 5 Region: 411-481
Classification Level Classification E-value
Superfamily Putative DNA-binding domain 1.37e-19
Family Domains B1 and B5 of PheRS-beta, PheT 0.0021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|125624962|ref|YP_001033445.1|
Sequence length 797
Comment phenylalanyl-tRNA synthetase subunit beta [Lactococcus lactis subsp. cremoris MG1363]
Sequence
MLVSYKWLKELVPNLTATPAELEQKMSTSGIEVEGVTSPQEGLSKLVVGEVLSSEDIPET
HLHITQVNVGADEALQIVCGAPNVRVGMKVIVALVGARIADNYKIKKGKIRGVESLGMLC
ALDEIGFDEKINPMKHEDGIFEMPADAKVGDSIFPYLDMDDEIIELSITPNRADALSMNG
AAWEVGAIYDLPVKLEEKSLVEASESVASKITVKVETDKVPTYKIRLIEGVKIAKSPQWL
QNRLMNAGVKPINNVVDVTNYVLMAFGQPLHSFDFAKFGSDEILVRQAKSGEKIATLDHV
ERELDDSDIVVTANGLPVALGGVMGGADSEITDETTNVALEAALFDGTSIRKTSQKFALR
SEASSRFEKGINEGTVREALDFAAAMIVELAGGKVLSGLVESNDYQPLLPKVSITLSRVN
GALGTDLSLETVKKIFVQLGFGVEVEGEKFTCEIPSRRWDIHIEADLVEEVARIYGYDNL
PSTLPLSQNAGELTDMQKFRRTVRTGLESSGLNEVIGYSLVTPEKATEFVGELETTSLMM
PMTEERQTLRANMIPGLLDIVNYNQNRKNADVAIYEIGNIFLPNADDIRPTEVPNLAFAI
SGNVVDKSYNGQAVPVDFYYAKGIVENLLETYEEVEFVPTNNQAAMHPGRTAVININGRL
AGFVGQIHPATAKKYDVAETYVASLDMKVMLEELPAQTIFNDIPKVQAVHRDIALLIDAE
VTHAQIVSVIKSSRVKTLKQVELFDIYQGKNLPAGKKSMAYSLTFQPAENTMTDDEITAA
VNKITKNLVEKLNVEIR
Download sequence
Identical sequences A0A165G9S6 A2RN74
gi|389855340|ref|YP_006357584.1| gi|125624962|ref|YP_001033445.1| 416870.llmg_2195 WP_011835888.1.100658 WP_011835888.1.31408 WP_011835888.1.33726

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]