SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|257068027|ref|YP_003154282.1| from Brachybacterium faecium DSM 4810

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|257068027|ref|YP_003154282.1|
Domain Number 1 Region: 97-225
Classification Level Classification E-value
Superfamily GntR ligand-binding domain-like 8.37e-18
Family GntR ligand-binding domain-like 0.011
Further Details:      
 
Domain Number 2 Region: 10-74
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 1.59e-17
Family GntR-like transcriptional regulators 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|257068027|ref|YP_003154282.1|
Sequence length 237
Comment transcriptional regulator [Brachybacterium faecium DSM 4810]
Sequence
MMRSKGTGNVAVERIQELILAEGLTPGDPMPTESALCEQLAISRSSVREAMRTLASLDIV
EVRHGHGTFVGQLSLSPLVDGLLFRARMDDGNDLRALREVVELRIAIDLSVADQLVELYR
DSSNPDLEELVEQMRELASAGRPFPDADAAFHTALFSRLDNGLLRQLAQAFWEIHTVAVP
LLQVPPAEDILDTVDAHQAMLSALEDGDAEAYRAAVIEHYRPLGRVLDAAASVEGPA
Download sequence
Identical sequences A0A1X6XJ89 C7M9Z8
YP_003154282.1.138 446465.Bfae_08380 gi|257068027|ref|YP_003154282.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]