SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|154151221|ref|YP_001404839.1| from Methanoregula boonei 6A8

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|154151221|ref|YP_001404839.1|
Domain Number 1 Region: 36-343
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.3e-52
Family Tandem AAA-ATPase domain 0.0032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|154151221|ref|YP_001404839.1|
Sequence length 903
Comment DEAD/DEAH box helicase [Methanoregula boonei 6A8]
Sequence
MRGGIALALELLGDHVRACIKKRGFAGLSPAQEQAIPLVLQKKNLVLIAPTGTGKTESAM
FPVFDSLVKMPAGGGIRAIYVTPLRSLNRDILSRMEWWCRELGLKVGVRHGDTPMAERRK
QALSPPDLLITTPETLQALFMGKRLRKHLEHVEFVIIDEIHEMAASKRGAQLAVALERLA
EYAGEFQRIGLSATVGNPETIARFLCGARPCAIVQVPVAKQLEIAVHFVGDDFKHQVRAL
EQALDREGSTLVFVNTRVTAEALGHALYPRGDVEVHHGSLSKEIRIDAEDRFKKGEIRTL
ICTSSMELGIDIGRVDHVIQFGSPREVARLVQRVGRAGHQLNTISRGTILTTGFDDLLES
LVIARRARANEIEPVVPEASAADVLANQVAAIAVEYGEIERSRIRTIVERTSLFAGSGTL
LDDVCTQLEEHRLVRLDGSRIVTTARARRYLSGNLSMIHDERKIPVFDMVSRRTVGTLDE
SFVVGWVHTGAVFITKGQLWRVLEINDGRLTVEPAKKAIGELPSWEGEQIPVPFAVAREA
GTIRRERTTGKYTQEKEGIAFADHVLSEMEKNRCKIPTDRLITFENIDDGVVCNVCAGHK
SNEALGRVLSILISARYGTTVGIELDAYRILLRLPSEVRAADVRDFFLSLEPAHMPGILK
LALKRTALFKWKLVQIAKKFGAIDPDADYEKISIQRLLDYFDNTVVQREAYRELLSGYMD
VDAAAEIVRRVKAGEIELAIGPHSIIGADGILSSRDQIPPPTADQAVLATLKRRLDQDEV
VLACMNCRNWKSRTVVSRVPEIPQCPKCGARLIAVLKPYEADTYETTAKKNKSPEERATE
QRLLRSANIVLSSGKKAVIALSARGVGPENASRILATLADGDAFYREILKAERNFIQTHR
YWS
Download sequence
Identical sequences A7I8Y5
456442.Mboo_1679 gi|154151221|ref|YP_001404839.1| WP_012107242.1.2930

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]