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Domain assignment for gi|117927841|ref|YP_872392.1| from Acidothermus cellulolyticus 11B

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|117927841|ref|YP_872392.1|
Domain Number 1 Region: 343-621
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.39e-67
Family RecA protein-like (ATPase-domain) 0.0000000593
Further Details:      
 
Domain Number 2 Region: 305-379
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 4.45e-18
Family Cold shock DNA-binding domain-like 0.00038
Further Details:      
 
Domain Number 3 Region: 40-79
Classification Level Classification E-value
Superfamily Rho N-terminal domain-like 0.00000369
Family Rho termination factor, N-terminal domain 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|117927841|ref|YP_872392.1|
Sequence length 676
Comment transcription termination factor Rho [Acidothermus cellulolyticus 11B]
Sequence
MTDISTAMPTVSGENSSPSGTSDESRGGARRRKAAESGTSSLSAMVLSELQALAASLGIT
GIARMRKGELIEAIRQRQGGSGAAAGGSPAGSDAGGESPGETPAARTTVSRSRGRRAVVP
ALQTTPTLDVEVPVQSTAAAPAGSPLEISPGTAETAQPPAARAGDGQMQRRAGRFGGRNA
TGAAGGGAGASPSQPAGFGPANGAAAVSAPTAGPGLGREAAQRGAPAGNGSRVAGGQAGS
PAETGGNGNGTVSNGAERRREDEEFADMGGRRRRGRFRERGGRLRVRERSDYEPAVSEDD
VLVPIAGILDVLDNYAFVRTSGYLPGPNDVYVSLAQVRRYGLRKGDAITGMVRQPREGER
REKFNPLVRLDTVNGMDPESARNRVEFSKLTPLYPQERLRLETEPQQITTRIIDLIAPIG
KGQRGLIVSPPKAGKTMVLQAIANAITRNNPECHLIVVLVDERPEEVTDMQRSVKGEVIS
STFDRPAEDHTMVAELSIERAKRLVELGHDVVILLDSITRLGRAYNTAAPASGRILSGGV
DSAALYPPKKFFGAARNIENGGSLTIIATALVETGSRGDEVIFEEFKGTGNMELKLDRKF
ADKRIFPAVDINASGTRKEEILLSPEELQIVWRLRRVLHALDPQQALEVLIEKMRQTRSN
AEFLVQVQKTMPMPSE
Download sequence
Identical sequences A0LSJ6
351607.Acel_0633 WP_011719469.1.7777 gi|117927841|ref|YP_872392.1|

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