SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|148377792|ref|YP_001256668.1| from Mycoplasma agalactiae PG2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|148377792|ref|YP_001256668.1|
Domain Number 1 Region: 145-223
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.37e-24
Family Translational machinery components 0.00035
Further Details:      
 
Domain Number 2 Region: 72-140
Classification Level Classification E-value
Superfamily dsRNA-binding domain-like 1.26e-22
Family Ribosomal S5 protein, N-terminal domain 0.00021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|148377792|ref|YP_001256668.1|
Sequence length 231
Comment 30S ribosomal protein S5 [Mycoplasma agalactiae PG2]
Sequence
MADLENKTVKANVENKPGAAKTQSVSAPKRTESGAKKQIWEKRSAHDSKDMPKKSVDRAN
KVKNRTRFGEANNEFSEKVVNISRVTKVVKGGRRFSFSAFVVVGDKKGKVGFGHGKANEV
PDAIKKAVKDARNHLISVPIQNKITVPHEIHAKFLASKVMLKPAPKGKGIVASGTVRAVV
ELAGYTDIYTKTYGSRSKANIVRATLKALQQLRTPEQIAEIRDKDVKDLLG
Download sequence
Identical sequences A5IYW9
347257.MAG_5300 WP_011949693.1.3023 gi|148377792|ref|YP_001256668.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]