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Domain assignment for gi|256394011|ref|YP_003115575.1| from Catenulispora acidiphila DSM 44928

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|256394011|ref|YP_003115575.1|
Domain Number 1 Region: 909-1047
Classification Level Classification E-value
Superfamily Ricin B-like lectins 1.31e-28
Family Ricin B-like 0.0042
Further Details:      
 
Weak hits

Sequence:  gi|256394011|ref|YP_003115575.1|
Domain Number - Region: 397-452,482-706
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.000199
Family Pectate transeliminase 0.028
Further Details:      
 
Domain Number - Region: 42-132,234-381
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.0471
Family Pectate transeliminase 0.028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|256394011|ref|YP_003115575.1|
Sequence length 1049
Comment ricin B lectin [Catenulispora acidiphila DSM 44928]
Sequence
MKARGIRSRTALWLSALVAVSAAAYGTQAAATPSVARAAVQTTLYASPTGSGSSCSQTSP
CALAEARSVVEGMNGSMTGDIVVYLTGGTYRLTSTFALGPQDSGTNGHTVYWEALPGQTP
VFDGAQQVTGWSQYNSGLNIWRAPVAAGTRAGDLWVDGARASVTKSAINPGGFSQSGASF
TTSDGSYRSWIDPTEAEIVDDNPWRQLHCPLAGITANGGGSSLNVNQACYNATLSNTGFP
FNGAGYPTLNHITWIENAYALLNQPGQWFLDSAGGSLYYIPLPGQNMSTADVELPVVQDL
VDVQGTPGHLTPINDTASGIAYSGSGWGSSTGRGLGDFQNDVHSTQTNGDSVSYTFTGSG
ITALTELNSDEGSIGVYIDGTLNQTVSAATSGQRTAEDAVVAVSGLTPGSHTIKLVKQSG
TWMLLDGFVVIPTAVQPAHDITFSGITFQHNTWLTELSQGYPENQTGVMWSETNPWNQVK
DPGMINVERGNHITFAGDTIAHTGDAGVDFGNGTQNSTLSTSRILDTAVNAVQVGEVDDY
YLTDTALMTSGDTVTGNFIEHSGVVFESTSGILVGYTRNVTVSHNDVGYSAAQGISVGWG
WGYASPYCSGCAHGYDYAGGNQVSYNYVYDNGLGDGAGNTVMAECIYTLGGQGDGNGSVW
STLTGNVCQDQYIYSNWGTIAHDEGSSYWQDRDNVVRWSGQDWMYYDQPTVNNITVGPTN
YSDNAGYRAVVPNNTSFTQAAIVPDGQWPAGAQAVITAAGPPAQVAPLTGTLDDTCLCLN
YTGSSWTWSGDRRLGDLDNGIHQATGNGDSFSVQFTGTGVSWIGEKSGSEGTAEIYVDGA
DKGSVNANSSPTQAQQTLYSVAGLAGGTHTLKVVKTGGTYLQVDAVNITGTAVVTGGSGG
TGGGTGTYPTGYHALTIASNNLCLDNYGAGSTAGAIIDQWSCNSGTNQQFQFVPTSGGYG
QLQIENSGQDVTVSGGSASQGVAGIVQQPVSTSTAAQWLPQQQSDGSWQFKNLNSGLCLD
VYGASSSQGQQLDQWPCKNAPGTNQDFKP
Download sequence
Identical sequences C7Q1K5
gi|256394011|ref|YP_003115575.1| 479433.Caci_4874

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