SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|383754413|ref|YP_005433316.1| from Selenomonas ruminantium subsp. lactilytica TAM6421

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|383754413|ref|YP_005433316.1|
Domain Number 1 Region: 3-241
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.08e-48
Family ABC transporter ATPase domain-like 0.0016
Further Details:      
 
Domain Number 2 Region: 312-518
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 9.41e-48
Family ABC transporter ATPase domain-like 0.002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|383754413|ref|YP_005433316.1|
Sequence length 638
Comment putative ABC transporter ATP-binding protein [Selenomonas ruminantium subsp. lactilytica TAM6421]
Sequence
MIITIENFTKSYGEKTLFSGIDFSMEAGDKVGIVGVNGTGKSTFLKAVAGLIPVDDGTMT
TMRGLQLEYLAQDKAFAPENTVLMEVFRGLSPLMQALREYELAMARAADNPDDKALQQEI
MRYTAVIDENDGWQIESSAKTVLTKLGINDFTAPVGSLSGGQQKRLALATALIQPCDLLI
LDEPTNHLDSETIAWLEEYLRGLKGALLMVTHDRYFLDNTANKILELDQGSAYTYTGNYS
EFLEQKAARLERLQATEAKRQNFLRNELKWLRRGAQARSTKQKARIQRYEEVKSQSVNIS
NDTVEIGLAGSRLGRTVIELDHVHYEVDGRTIVQDFTYTVLRNDRVAILGANGTGKTTLL
NIIAGLQQPTSGTVTIGQTVKIGYFAQQAREMDERLRAIEYVQEAAHYITLADGTRISAS
QLMERFLFPGDLQWTPISRLSGGEKRRLYLLRVLMEEPNVLLLDEPTNDLDLETMAVLES
FIDDFQGAIIFVSHDRFFVDRLADKVFAYEAGGRLRMYSGGYSYYKERLAEEQAETEDTV
KKEKTAELKAKPAASHDSEPAAKRRFTFKEQKEYAEIEGIIASKEGELKVVQLQMAENAT
NFGKLNELAKEETRLSAELEQLMERWEYLEAIAEEQSQ
Download sequence
Identical sequences I0GRA6
WP_014424728.1.93961 gi|383754413|ref|YP_005433316.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]