SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|333977878|ref|YP_004515823.1| from Desulfotomaculum kuznetsovii DSM 6115

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|333977878|ref|YP_004515823.1|
Domain Number 1 Region: 56-396
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.17e-80
Family Extended AAA-ATPase domain 0.00000000562
Further Details:      
 
Domain Number 2 Region: 8-43
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000000000257
Family ClpX chaperone zinc binding domain 0.0025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|333977878|ref|YP_004515823.1|
Sequence length 416
Comment ATP-dependent Clp protease ATP-binding subunit ClpX [Desulfotomaculum kuznetsovii DSM 6115]
Sequence
MFNDKGQLKCSFCGKLQDQVKKLVAGPGVYICDECIELCNEIIEEELSEDLGLDLGDIPK
PKEIKEILDQYVIGQEQAKKTLAVAVYNHYKRINLGGKIDDVELQKSNIIMLGPTGCGKT
LLAQTLARLLNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIVYIDEI
DKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQLDTTNILFI
CGGAFDGIEKIIQNRIGKKGLGFGAEIQSRRDQKIGEILSQILPEDLLKYGLIPEFVGRL
PIIVTLDALDEEALIRILTEPKNALVKQYEKLFELDGVSLEFHPDALRTVAQEALKRNTG
ARGLRAILEDIMLDVMYEIPSREDIARVIITKETILKKEKPLVVALDRKKKKEETA
Download sequence
Identical sequences F6CP85
gi|333977878|ref|YP_004515823.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]