SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|113477618|ref|YP_723679.1| from Trichodesmium erythraeum IMS101

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|113477618|ref|YP_723679.1|
Domain Number 1 Region: 115-297
Classification Level Classification E-value
Superfamily E set domains 3.69e-57
Family Cytoplasmic domain of inward rectifier potassium channel 0.0000124
Further Details:      
 
Domain Number 2 Region: 30-141
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 1.3e-22
Family Voltage-gated potassium channels 0.0000635
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|113477618|ref|YP_723679.1|
Sequence length 299
Comment K+ channel, inward rectifier, region 2 [Trichodesmium erythraeum IMS101]
Sequence
MKRNTTKKQKAFARKVGLMDFVIKGIPSFYWSDFYHWLMTISWRQLWVIIISFYFLINTI
FALLYLGSGDGIHNAKPGSFIDAFSFSIQTIATIGYGAMYPTNIYTHILVAIEVFIGLIG
IAMITGLMFARFSLPTARVLFSRIAVISPYDGVPTLMFRIANQRQNWIVEAEVKATVLLN
KEVSIEGHSLRKFGDLKLVRSETPMLSLTWLVMHQIDKDSPLYGWSEDDFKNINNQSIQL
FITLTGLDETVSQTIHARHVYRLDQILWHQRFVDLISTGIDGRFYLDYSLFHDVVPLQK
Download sequence
Identical sequences Q10X18
203124.Tery_4204 gi|113477618|ref|YP_723679.1| WP_011613536.1.43450

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]