SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|148827459|ref|YP_001292212.1| from Haemophilus influenzae PittGG

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|148827459|ref|YP_001292212.1|
Domain Number 1 Region: 4-136
Classification Level Classification E-value
Superfamily Ribonuclease H-like 7.28e-41
Family Putative Holliday junction resolvase RuvX 0.00000256
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|148827459|ref|YP_001292212.1|
Sequence length 139
Comment Holliday junction resolvase-like protein [Haemophilus influenzae PittGG]
Sequence
MGITALAFDFGTKSIGCAIGQSITGTAQALPAFKAQDGIPNWEAIEKCLKEWKPDVVIVG
LPLNMDGTEQDLTLRARKFANRLQGRFGVNVHLQDERLTTTQARSEIFERGGFKALKKGK
IDGVSACLILESWFEYAEY
Download sequence
Identical sequences A0A0C5F8T3 A0A0E1SPN9 A0A0X9ZJW4 A4MXQ9 A4NW33 A5UGC3 E1X9U8 E7A8A9 F2C2M4 P43981 Q4QNN8
gi|378696496|ref|YP_005178454.1| gi|68248907|ref|YP_248019.1| gi|386265298|ref|YP_005828790.1| NP_438472.1.63031 WP_005648994.1.101347 WP_005648994.1.1036 WP_005648994.1.10621 WP_005648994.1.12329 WP_005648994.1.12713 WP_005648994.1.13610 WP_005648994.1.15261 WP_005648994.1.17173 WP_005648994.1.17253 WP_005648994.1.17428 WP_005648994.1.17459 WP_005648994.1.20018 WP_005648994.1.20853 WP_005648994.1.23065 WP_005648994.1.23149 WP_005648994.1.25413 WP_005648994.1.26077 WP_005648994.1.28397 WP_005648994.1.32982 WP_005648994.1.34925 WP_005648994.1.3733 WP_005648994.1.37452 WP_005648994.1.38938 WP_005648994.1.38951 WP_005648994.1.39279 WP_005648994.1.39974 WP_005648994.1.40038 WP_005648994.1.40040 WP_005648994.1.42267 WP_005648994.1.42729 WP_005648994.1.42821 WP_005648994.1.43923 WP_005648994.1.44893 WP_005648994.1.45125 WP_005648994.1.4569 WP_005648994.1.50588 WP_005648994.1.50795 WP_005648994.1.51509 WP_005648994.1.52701 WP_005648994.1.5387 WP_005648994.1.55069 WP_005648994.1.56181 WP_005648994.1.57312 WP_005648994.1.59352 WP_005648994.1.59529 WP_005648994.1.6054 WP_005648994.1.61426 WP_005648994.1.61635 WP_005648994.1.62697 WP_005648994.1.63263 WP_005648994.1.64134 WP_005648994.1.68713 WP_005648994.1.75193 WP_005648994.1.76369 WP_005648994.1.76422 WP_005648994.1.76737 WP_005648994.1.78014 WP_005648994.1.79255 WP_005648994.1.79564 WP_005648994.1.79785 WP_005648994.1.81823 WP_005648994.1.82376 WP_005648994.1.85362 WP_005648994.1.8638 WP_005648994.1.86649 WP_005648994.1.87366 WP_005648994.1.87894 WP_005648994.1.8829 WP_005648994.1.88810 WP_005648994.1.90320 WP_005648994.1.91188 WP_005648994.1.92858 WP_005648994.1.93392 WP_005648994.1.93908 WP_005648994.1.9694 WP_005648994.1.9761 WP_005648994.1.98200 WP_005648994.1.99326 WP_005648994.1.99776 gi|319775826|ref|YP_004138314.1| 281310.NTHI0416 374931.CGSHiGG_04340 71421.HI0305 gi|319896638|ref|YP_004134831.1| gi|386263501|ref|YP_005826994.1| APC503 HI0305 gi|148827459|ref|YP_001292212.1| gi|16272260|ref|NP_438472.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]