SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|162456040|ref|YP_001618407.1| from Sorangium cellulosum 'So ce 56'

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|162456040|ref|YP_001618407.1|
Domain Number 1 Region: 49-257
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 0.0000000000145
Family L-arabinose binding protein-like 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|162456040|ref|YP_001618407.1|
Sequence length 343
Comment Bmp family lipoprotein [Sorangium cellulosum So ce56]
Sequence
MLKKRRVALAVLLALASALAGCNSSKKADCASPEVFCVGLVTDMGKIDDKSFNQSAWEAI
QRAQKELGATTQYIETTDPKDYPKNIGTFAEERYDVVVTSGFGLTEATRAAADQFSGVKF
IGIDQFQIATKPNVVGLVFPEDHGGFLVGALAAMMTKTGKIGAVLATDAVPPVWRFGEGF
RAGARHVKPDIELSVVYHNDVGFDKTFTDPEWGKTTAVSMIDKGVDIVFGGGGKTGNGAL
LGAATKGVYAIGVDTDQYFTVPEAQKVLLSSAVKLISDGTFDLIKSAKEGKLPAGNFQGK
SGYAPYHDLDAKVPAEVKAKMEELRKGLLDGTLKTAVPPAKGP
Download sequence
Identical sequences A9FAQ0
gi|162456040|ref|YP_001618407.1| WP_012240366.1.90317 448385.sce7758

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]