SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|557827823|ref|YP_008800298.1| from Exiguobacterium sp. MH3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|557827823|ref|YP_008800298.1|
Domain Number 1 Region: 250-548
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain III 4.19e-87
Family DNA repair protein MutS, domain III 0.000000784
Further Details:      
 
Domain Number 2 Region: 550-782
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.95e-61
Family ABC transporter ATPase domain-like 0.000000675
Further Details:      
 
Domain Number 3 Region: 4-115
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain I 2.09e-41
Family DNA repair protein MutS, domain I 0.0000275
Further Details:      
 
Domain Number 4 Region: 119-260
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain II 1.57e-27
Family DNA repair protein MutS, domain II 0.0025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|557827823|ref|YP_008800298.1|
Sequence length 843
Comment DNA mismatch repair protein MutS [Exiguobacterium sp. MH3]
Sequence
MEAVHNTPMMKQYFSIKADYPDAFLFYRLGDFYELFFEDAKKVAHELELTLTAKNGKNAE
HPIPMCGVPHHAANGYIEQLIERGYKVALCDQVEDPKLTKGLVKREVIQVITPGTLMSAL
TEKENRYLVAVVEQDGRFGIARGDVSTGESALTSVATLDGVVKELSIILPREIIVTTEEH
ETALAHLRIPLTRSSRRESHPHGDRAINAAQAEAFAVLYAYMHDTQKRALTHLQPAVVYE
ASDFMQLEPNTVKNLELVRSARTGDKKGSLLGLLDVTGTAMGGRMLKRWLEKPLLSERVI
TERLDAVEELLQHYFERQQLKDTLREVYDLERLVAKVGYGTASARDLVQLKSTLRLIPRI
QSALEEMMSERLGQLSLGLDPHDELSDLLDRAFVEAPPISTKEGGMIKAGYSADLDELLV
ASKDGKTWLATLEASERAATGIKTLKIGYNRVFGYYIEVSRANAKLLPEGRYERKQTLAN
AERYITPELKEKEALILGAEEKSVTLEYDLFCGVRDEVKGHIESLQRVSRRIAELDVLVA
LAEIAETHDYVRPITTTGRTVDIQQGRHPVIETVLPRGEYVANGITLNEGREMLLITGPN
MSGKSTYMRQFALIALLHQIGSFVPAAQAELPIFDQIFTRIGAADDLVSGQSTFMVEMVE
TQEALTRATDRSLILLDEIGRGTSTYDGMALAQAIVEHIARHVGAKTLFSTHYHELTVLE
ESIDRLANVHVRAVEQDGRVVFLHEVRDGKADQSYGIHVARLADLPDSLIERAQVLLSEF
EQAEPVPVAAPVKAPVQEEPIDQLSLFSDADPLRETMASLDLINMTPLEALNTLYRLQAE
ARK
Download sequence
Identical sequences WP_023467715.1.79814 gi|557827823|ref|YP_008800298.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]