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Domain assignment for gi|159040873|ref|YP_001540125.1| from Caldivirga maquilingensis IC-167

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|159040873|ref|YP_001540125.1|
Domain Number 1 Region: 138-193
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 0.00000807
Family YlxM/p13-like 0.06
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|159040873|ref|YP_001540125.1|
Sequence length 207
Comment bacterio-opsin activator [Caldivirga maquilingensis IC-167]
Sequence
MIKVLIKAYRNDCLVQNTLSKLNLGFDVLMINISDGKSTHLISTNRPLTRHELDLLRESG
LRMRKVNENVMWIESPSCSSCRVLGHGGFMVIEGKSLDSNTVIYGILLPSRGYLRSLMKD
FLNESVKAEVVYAQAIKVKTLTSRQLEVLQLAYSRGLFDDKRRVSISELAKELGISPATL
TVLIRRGIKKVLEDYFRHTLSETGSHS
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Identical sequences A8MAU9
gi|159040873|ref|YP_001540125.1| WP_012185355.1.60673 397948.Cmaq_0287

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