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Domain assignment for gi|158312266|ref|YP_001504774.1| from Frankia sp. EAN1pec

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|158312266|ref|YP_001504774.1|
Domain Number 1 Region: 187-339
Classification Level Classification E-value
Superfamily Ribonuclease H-like 2.73e-20
Family Retroviral integrase, catalytic domain 0.02
Further Details:      
 
Domain Number 2 Region: 70-165
Classification Level Classification E-value
Superfamily Homeodomain-like 0.000000052
Family Paired domain 0.058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|158312266|ref|YP_001504774.1|
Sequence length 368
Comment integrase catalytic subunit [Frankia sp. EAN1pec]
Sequence
MSAGRDPCRAGWMVMVWSLLYALTRNTLGLMLLRVRGDAAKDVELLVLRHQVAVLRRRVH
RPALEPADRVILAALSRLLPRASWDIFFVTPATVLRWHRELLARKWTYPRKTHGRPPIRR
EIRELVLRLARENPTWGHRRIQGELVGLGYSVGVATVWRILHRAGVDPAPRRADTSWRTF
LRAQASGILACDFFTVDTVFLQRIYVFFVVEHATRRVHVLGVTKHPTTAWVTQQARNLLI
DLEERSHRFRFLLRDRDTKFTSSFDAVFTGAGIDVVRTPPQAPQANAIAERWVGTARREC
TDRLLIVSERHLTSVLDSYAEHFNTHRPHRSLGQHPPDSPPVVAPTSESTVRRTRILGGL
INEYRNAA
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Identical sequences A8LGC9
gi|158312266|ref|YP_001504774.1| WP_012157844.1.9268 298653.Franean1_0402

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