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Domain assignment for gi|158312330|ref|YP_001504838.1| from Frankia sp. EAN1pec

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|158312330|ref|YP_001504838.1|
Domain Number 1 Region: 169-325
Classification Level Classification E-value
Superfamily Ribonuclease H-like 2.28e-20
Family Retroviral integrase, catalytic domain 0.036
Further Details:      
 
Domain Number 2 Region: 75-150
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0000251
Family Paired domain 0.047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|158312330|ref|YP_001504838.1|
Sequence length 355
Comment integrase catalytic subunit [Frankia sp. EAN1pec]
Sequence
MFVRLLYLIFVRVCGWLVLLGRSSASKDIELLVLRHEVAVLRRTQPKPRWDWADRAVLAA
LIRLLPKALRAHRLVTPGTVLRWHRRLIVRKWTHPQRMGRPPVGTEIVPLIERLATENTT
WGYQRIRGELLKLGHRVSASTIRRVLTSLGLPPAPQRQTDTTWRQFLRTQASTMLAVDFF
HVDCAVTLRRLYCFFVIEVGSRTVHILGVTAHPDGPWTTQQIRNLLMNLGDRAADFQVLI
RDRAGQFTASFDAVLIDAGITTIKIPPRTPRANAYAERFVRTVRTEVTDRMLIFGERHLR
VVLAEYARHYNGRRPHRALRLQPPRPDHPIADVTTARIKRRPVLGGLINEYERAA
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Identical sequences A8LGJ3
298653.Franean1_0469 gi|158312330|ref|YP_001504838.1| WP_020458126.1.9268

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