SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for gi|158312334|ref|YP_001504842.1| from Frankia sp. EAN1pec

Domain architecture

Domain assignment details

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Strong hits

Sequence:  gi|158312334|ref|YP_001504842.1|
Domain Number 1 Region: 173-325
Classification Level Classification E-value
Superfamily Ribonuclease H-like 3.03e-16
Family Retroviral integrase, catalytic domain 0.029
Further Details:      
Domain Number 2 Region: 75-150
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0000014
Family Paired domain 0.03
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|158312334|ref|YP_001504842.1|
Sequence length 355
Comment integrase catalytic subunit [Frankia sp. EAN1pec]
Download sequence
Identical sequences A8LGJ7
298653.Franean1_0474 gi|158312334|ref|YP_001504842.1| WP_020458130.1.9268

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