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Domain assignment for gi|158312338|ref|YP_001504846.1| from Frankia sp. EAN1pec

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|158312338|ref|YP_001504846.1|
Domain Number 1 Region: 170-324
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.12e-16
Family Retroviral integrase, catalytic domain 0.034
Further Details:      
 
Domain Number 2 Region: 75-150
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0000806
Family Paired domain 0.057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|158312338|ref|YP_001504846.1|
Sequence length 355
Comment integrase catalytic subunit [Frankia sp. EAN1pec]
Sequence
MSVRLLYLIFVRVCGWLVLLGRSSASKDIELLVLRHEVAVLRRTQPKPRWDWADRAVLAA
LIRLLPRALRAHRLVTPGTVLRWHRRLITRKWTHPQRTGRPPIGTEIATLIERLATENTT
WGYQRIQGELLTLGHRVSASTIRRVLKTLGLPPAPKRQTDTTWRQFLRTQASTMLAVDFF
HVDCAVTLRRLHCFFVIEVDSRTVHILGVTAHPDGPWTTQQARNLLMDLGDQAADFQFLI
RDRAGQFTASFDTVLADAGITAVTIPPRAPRANAYAERFVRTVRTEVTDRMLIVGERHLR
MVLAEYARHYNGRRPHRGRDLQPPRPDHPVADLTQERIKRQPVLGGLINEYERAA
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Identical sequences A8LGK1
gi|158312338|ref|YP_001504846.1| WP_020458134.1.9268 298653.Franean1_0478

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