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Domain assignment for gi|158314846|ref|YP_001507354.1| from Frankia sp. EAN1pec

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|158314846|ref|YP_001507354.1|
Domain Number 1 Region: 174-325
Classification Level Classification E-value
Superfamily Ribonuclease H-like 4.25e-19
Family Retroviral integrase, catalytic domain 0.034
Further Details:      
 
Domain Number 2 Region: 75-150
Classification Level Classification E-value
Superfamily Homeodomain-like 0.000043
Family Paired domain 0.053
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|158314846|ref|YP_001507354.1|
Sequence length 355
Comment integrase catalytic subunit [Frankia sp. EAN1pec]
Sequence
MSVRLLYLIFVRVCGWLVLLGRSSASKDIELLVLRHEVAVLRRTQPKPRWDWADRAVLAT
LIRLLPRALRAHRLVTPGTVLGWHRRLITRKWTHPQRTGRPPISPEIATLIKRLATENTT
WGYQRIQGELLKLGHRVGASTIRRVLKSLGLPPAPRRQTDTTWRQFLRAQASTMLAVDFF
HVDCAVTLRRLYCFFVLEVGSRTVHILGVTAHPDGSWTTQQIRNFLMDLGDRAGDFQFLV
RDRAGQFTASFDAVLADAGITAVKIPPRTPRANAYAERFVRTVRTEVTDRMLIFGERHLR
TILAEYAAHYNGRRPHRSRDLQPPRPDHPIANLTKERIKRRPVLGGLINEYERAA
Download sequence
Identical sequences A8LBT0
gi|158314846|ref|YP_001507354.1| 298653.Franean1_3035 WP_020460597.1.9268

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