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Domain assignment for gi|158315209|ref|YP_001507717.1| from Frankia sp. EAN1pec

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|158315209|ref|YP_001507717.1|
Domain Number 1 Region: 113-269
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.52e-19
Family Retroviral integrase, catalytic domain 0.028
Further Details:      
 
Domain Number 2 Region: 19-94
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0000466
Family Paired domain 0.055
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|158315209|ref|YP_001507717.1|
Sequence length 299
Comment integrase catalytic subunit [Frankia sp. EAN1pec]
Sequence
MLAALIRLLPRALRAHRLITPGTVLRWHRRLITRKWTSSRRMGQPPVGTEIVTLIERLAT
ENTTWGYPRIRGELLKLGHRVSASTIRRVLTSLGLPPAPQRQTDTTWRQFLRTQASTMLA
VDFFHVDCAVTLRRLYCFFVIEVGSRIVHILGVTAHPDGPWTTQQARNLLMDLGDRAADF
QFLVRDRAGQFTASFDAVLADAGITAIKIPPRTPRANAYAERFVRTVRTEVTDRMLIFGE
RHLRTVLAEYARHYNGRRPHRGCGLQPPRPDHPVADLTKERIKRRPVLGGLINEYERAA
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Identical sequences A8LH40
gi|158315209|ref|YP_001507717.1| 298653.Franean1_3409 WP_020460952.1.9268

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