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Domain assignment for gi|158315214|ref|YP_001507722.1| from Frankia sp. EAN1pec

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|158315214|ref|YP_001507722.1|
Domain Number 1 Region: 187-338
Classification Level Classification E-value
Superfamily Ribonuclease H-like 3.95e-18
Family Retroviral integrase, catalytic domain 0.029
Further Details:      
 
Domain Number 2 Region: 71-165
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0000000197
Family Paired domain 0.068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|158315214|ref|YP_001507722.1|
Sequence length 368
Comment integrase catalytic subunit [Frankia sp. EAN1pec]
Sequence
MPAGLGLCRAGWMVMVWSLLYALTRNALGLMLLHVRGDTAKDVELLVLRHQVAVLRRQVN
RPTLEPADRVILAALSRLLPRARWGSFFVTPATVLRWHREFLARKWTYPRKTPGRPPVRR
EIRELVLRLAQENPTWGHRRIQGELVGLGYPVGVATVWRILHRAGIDPAPRRADTSWRTF
LRAQASGLLACDFFTVDTVFLQRIYVFFVVEHATRRVHVLGATKHPTSAWVTQRARNLLM
DLDERSHRFRFLIRDRDTKFTASFDAVFAGAGIDVVRTPPQAPTANAIAERWVGTARREC
TDRLLIVSERHLTSVLGSYAEHFNTHRPHRSLGQHPPDPPPMVTPTSDSTVRRTRILGGL
INEYRNAA
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Identical sequences A8KXN2
298653.Franean1_3414 gi|158315214|ref|YP_001507722.1|

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