SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|158315837|ref|YP_001508345.1| from Frankia sp. EAN1pec

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|158315837|ref|YP_001508345.1|
Domain Number 1 Region: 52-135
Classification Level Classification E-value
Superfamily Tetracyclin repressor-like, C-terminal domain 0.00000000127
Family Tetracyclin repressor-like, C-terminal domain 0.008
Further Details:      
 
Domain Number 2 Region: 2-46
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0000018
Family Tetracyclin repressor-like, N-terminal domain 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|158315837|ref|YP_001508345.1|
Sequence length 160
Comment TetR family transcriptional regulator [Frankia sp. EAN1pec]
Sequence
MGIEQIGAAVGIRGPGIYRHFPSKDAVLVELLVGISQHLLDAAREARRVGASALETLDLL
VRGHVEFALDNPDLIVIHDRDLWSLPEPAEREVRRLQRAYVEQWVDVLRQVRPELDAPTA
RARTHALFGLINSTPHSATDLQRAEMAVMLHTMALGAARG
Download sequence
Identical sequences A8L5S9
298653.Franean1_4052 gi|158315837|ref|YP_001508345.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]