SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|158316082|ref|YP_001508590.1| from Frankia sp. EAN1pec

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|158316082|ref|YP_001508590.1|
Domain Number 1 Region: 36-118
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0000000000000426
Family Tetracyclin repressor-like, N-terminal domain 0.0075
Further Details:      
 
Domain Number 2 Region: 112-232
Classification Level Classification E-value
Superfamily Tetracyclin repressor-like, C-terminal domain 0.0000000181
Family Tetracyclin repressor-like, C-terminal domain 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|158316082|ref|YP_001508590.1|
Sequence length 236
Comment TetR family transcriptional regulator [Frankia sp. EAN1pec]
Sequence
MQYFLYMAQKTELPVITPTEEPAWKQRAVERSTRAAKLRAEQRVVQFLDAAQAIIAEKGS
IDLTVQEVVDRSRQSLRSFYQHFSGKHELLLALFEDALNESARQIREASATEPDPLGQLR
ITVRLLYEQSHSDRARQQRPLFTDFAPQLLVSHPAEVKVAHAPLLALITDMMTRAAAAGQ
LRPDLKPRRAAAMVMQTVMFLAQSNGVSEDENVHPITVEEVWDFCLTGFTGGTRTT
Download sequence
Identical sequences A8L9I1
gi|158316082|ref|YP_001508590.1| 298653.Franean1_4300

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]