SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|158316137|ref|YP_001508645.1| from Frankia sp. EAN1pec

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|158316137|ref|YP_001508645.1|
Domain Number 1 Region: 39-228
Classification Level Classification E-value
Superfamily Class I glutamine amidotransferase-like 2.65e-46
Family DJ-1/PfpI 0.0027
Further Details:      
 
Domain Number 2 Region: 248-295
Classification Level Classification E-value
Superfamily Homeodomain-like 0.00000000323
Family AraC type transcriptional activator 0.02
Further Details:      
 
Domain Number 3 Region: 299-349
Classification Level Classification E-value
Superfamily Homeodomain-like 0.00000086
Family AraC type transcriptional activator 0.053
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|158316137|ref|YP_001508645.1|
Sequence length 356
Comment AraC family transcriptional regulator [Frankia sp. EAN1pec]
Sequence
MFVFRSAGPRGSRVPVSPCRPPETYGSGLNATYPKDQAMHRIVVVAVPPVTTLDLSIPAA
VFPAAVVHSQPAYEVVICTAEPGIVPGYTGPSVVVDRGLDVIDSADTVIVTGTGARAHAD
QRVLDALQRAADDGRRIASICTGAFVLAQAGLLNGRPATTYWQYSQEMRRRFPAVDLRPD
VLYVDDGTVLTSAGLAAGLDLCIHMIRRDHGAVVANAVARAAVIAPIRPGGQAQFIETPL
PPENGTSLAQTRAWAAEHLAEPLTLARLAAHAHTSTRTLTRRFREETGLSPLQWLLHQRI
DRARELLEATDLPITAVARQSGLGTPESLRLHLLRRNGLTPSAYRDTFTRVGPTPT
Download sequence
Identical sequences A8L9N6
298653.Franean1_4355 gi|158316137|ref|YP_001508645.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]